RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 FXYD3Q14802 87 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 ECSCRQ19T08 205 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 AKIRIN2Q53H80 203 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 OR2B11Q5JQS5 317 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 ZNF818PQ6ZRF7 136 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 ZNF695Q8IW36 515 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 KLHL30-AS1Q8NEE0 82 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 OR52I2Q8NH67 350 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 MTFP1Q9UDX5 166 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 FOXA2Q9Y261 457 aaPredicted RBP12.93□□□□□ -0.34
CDT1-202ENST00000562747 DNAH9Q9NYC9 4486 aa12.93□□□□□ -0.34
CDT1-202ENST00000562747 CCDC160A6NGH7 325 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 ARPC1BO15143 372 aaKnown RBP12.92□□□□□ -0.34
CDT1-202ENST00000562747 TNFSF12O43508 249 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 CREBL2O60519 120 aaPredicted RBP12.92□□□□□ -0.34
CDT1-202ENST00000562747 CNIH1O95406 144 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 GNRHRP30968 328 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 BRWD1-AS2P59051 145 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 TSPAN5P62079 268 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 SSBP2P81877 361 aaPredicted RBP12.92□□□□□ -0.34
CDT1-202ENST00000562747 VAX1Q5SQQ9 334 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 TMEM65Q6PI78 240 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 LCNL1Q6ZST4 164 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 MYOZ3Q8TDC0 251 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 FCAMRQ8WWV6 532 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 FAM103A1Q9BTL3 118 aaKnown RBP12.92□□□□□ -0.34
CDT1-202ENST00000562747 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
CDT1-202ENST00000562747 NXF2Q9GZY0 626 aaKnown RBP12.92□□□□□ -0.34
CDT1-202ENST00000562747 KLK11Q9UBX7 282 aa12.92□□□□□ -0.34
CDT1-202ENST00000562747 A0A1W2PN81 502 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 GABARAPH6UMI1 98 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 RBFOX2O43251 390 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDT1-202ENST00000562747 SAA1P0DJI8 122 aaPredicted RBP12.91□□□□□ -0.34
CDT1-202ENST00000562747 TBPP20226 339 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 CHRNA7P36544 502 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 GNB1P62873 340 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 SSBP1Q04837 148 aaKnown RBP12.91□□□□□ -0.34
CDT1-202ENST00000562747 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 PRSS8Q16651 343 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 MRGPRG-AS1Q2M3A8 158 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 RNASE12Q5GAN4 147 aaKnown RBP12.91□□□□□ -0.34
CDT1-202ENST00000562747 PYHIN1Q6K0P9 492 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 UNQ5815/PRO19632Q6UWF5 114 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 C18orf65Q6ZTR6 163 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 LFNGQ8NES3 379 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 OR5M8Q8NGP6 311 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 VSTM2AQ8TAG5 236 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 TMEM68Q96MH6 324 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 GPHA2Q96T91 129 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 RBM38Q9H0Z9 239 aaKnown RBP12.91□□□□□ -0.34
CDT1-202ENST00000562747 RSL24D1Q9UHA3 163 aaKnown RBP12.91□□□□□ -0.34
CDT1-202ENST00000562747 A3GALT2U3KPV4 340 aa12.91□□□□□ -0.34
CDT1-202ENST00000562747 ZNF701M0R085 212 aaPredicted RBP12.9□□□□□ -0.34
CDT1-202ENST00000562747 HRASP01112 189 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 CD33P20138 364 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 MYCNOSP40205 109 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 RAB9AP51151 201 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 IDO2Q6ZQW0 420 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 CMTM1Q8IZ96 169 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 SPAG16Q8N0X2 631 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 MCFD2Q8NI22 146 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 GRPEL2Q8TAA5 225 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 CD300LFQ8TDQ1 290 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 C4orf3Q8WVX3 66 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 UBE2E2Q96LR5 201 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 AIFM2Q9BRQ8 373 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
CDT1-202ENST00000562747 GPR31O00270 319 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 CTDSPLO15194 276 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 SOX15O60248 233 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 IFNA6P05013 189 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 CD40LGP29965 261 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 DGCR2P98153 550 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 IL18Q14116 193 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 KIAA0141Q14154 515 aaPredicted RBP12.89□□□□□ -0.35
CDT1-202ENST00000562747 TNXAQ16473 311 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
CDT1-202ENST00000562747 AADACL3Q5VUY0 350 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 MMD2Q8IY49 270 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 ARRDC1Q8N5I2 433 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 ZNF491Q8N8L2 437 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 POC5Q8NA72 575 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 TMEM229BQ8NBD8 167 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 SMIM4Q8WVI0 70 aa12.89□□□□□ -0.35
CDT1-202ENST00000562747 ZNF430Q9H8G1 570 aaPredicted RBP12.89□□□□□ -0.35
CDT1-202ENST00000562747 M0QYG6 137 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 RAMP3O60896 148 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 PGLYRP1O75594 196 aaPredicted RBP12.88□□□□□ -0.35
CDT1-202ENST00000562747 KBTBD11O94819 623 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 OR2A4O95047 310 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 HPRT1P00492 218 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 CD3DP04234 171 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 S100GP29377 79 aa12.88□□□□□ -0.35
CDT1-202ENST00000562747 UCP3P55916 312 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms