RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 URB1O60287 2271 aaKnown RBP11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 PCSK5Q92824 1860 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 CER1O95813 267 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 CD33P20138 364 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 Q8N7P7 452 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 CBY1Q9Y3M2 126 aa11.66□□□□□ -0.54
VPS9D1-202ENST00000561976 AHCTF1Q8WYP5 2266 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 SOX15O60248 233 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 THBS3P49746 956 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 OR10G8Q8NGN5 311 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 RAB1CQ92928 201 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 PLPPR2Q96GM1 343 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 HEYLQ9NQ87 328 aaPredicted RBP11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 TRBV20OR9-2A0A075B6H5 130 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 SCO2A0A1W2PP80 73 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 OR9G9P0C7N8 305 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 UBE2NP61088 152 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 ZNF90Q03938 601 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 LRP11Q86VZ4 500 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 ZCCHC14Q8WYQ9 949 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 COQ2Q96H96 371 aa11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 HSD17B10Q99714 261 aaKnown RBP11.65□□□□□ -0.54
VPS9D1-202ENST00000561976 TNRC18O15417 2968 aaPredicted RBP11.65□□□□□ -0.55
VPS9D1-202ENST00000561976 KIR2DL5BA0A0G2JN68 375 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 KIR2DL5BA0A0G2JPC4 375 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 PSG7Q13046 419 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 PRAMEF5Q5TYX0 476 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 PRAMEF6Q5VXH4 476 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 KIR2DL5AQ8N109 375 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 FAM234AQ9H0X4 552 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 DEFB127Q9H1M4 99 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 FCGR3BO75015 233 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 CBLN1P23435 193 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 RPP30P78346 268 aaKnown RBP11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 ZNF766Q5HY98 468 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 MIC13Q5XKP0 118 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 OR4A16Q8NH70 328 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 OCC1Q8TAD7 63 aa11.64□□□□□ -0.55
VPS9D1-202ENST00000561976 TMEM210A6NLX4 147 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 HPRT1P00492 218 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 ZNF25P17030 456 aaPredicted RBP11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 MEOX1P50221 254 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TDGF1P3P51864 188 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TPPP2P59282 170 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 GABRA6Q16445 453 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 Q6ZR03 302 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 OR13A1Q8NGR1 328 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 PARD6AQ9NPB6 346 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TMEM106BQ9NUM4 274 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 MPDU1O75352 247 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 CXorf1O96002 111 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TIMP3P35625 211 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 OPRK1P41145 380 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TMEM249Q2WGJ8 235 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TREML4Q6UXN2 200 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 TMEM105Q8N8V8 129 aa11.63□□□□□ -0.55
VPS9D1-202ENST00000561976 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 IQCF6A8MYZ5 107 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 RRHO14718 337 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 RAB4AP20338 218 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 MPV17P39210 176 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 MS4A5Q9H3V2 200 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 HES4Q9HCC6 221 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 KMT2EQ8IZD2 1858 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 J3QW42 95 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 SLC17A3O00476 420 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 AQP7O14520 342 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 CRISP2P16562 243 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 GPR12P47775 334 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 FOXF2Q12947 444 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 EDDM3AQ14507 147 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 VKORC1L1Q8N0U8 176 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 MGST2Q99735 147 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 SPINT2O43291 252 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 LYZL6O75951 148 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 ACP7Q6ZNF0 438 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 BAGE3Q86Y29 109 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 BAGE2Q86Y30 109 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 WDR31Q8NA23 367 aa11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 KLF14Q8TD94 323 aaPredicted RBP11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 MRPL18Q9H0U6 180 aaKnown RBP11.62□□□□□ -0.55
VPS9D1-202ENST00000561976 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 DCAF10Q5QP82 559 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 Q6ZWC4 215 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 ABHD12Q8N2K0 398 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 HSPB9Q9BQS6 159 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 GGTLC1Q9BX51 225 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 IL17BQ9UHF5 180 aa11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 YTHDF2Q9Y5A9 579 aaKnown RBP11.61□□□□□ -0.55
VPS9D1-202ENST00000561976 SERF1AO75920 110 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms