RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 HFEQ30201 348 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 AWAT1Q58HT5 328 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 SLC25A48Q6ZT89 311 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 ZNF383Q8NA42 475 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 OR10A7Q8NGE5 316 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 CCL17Q92583 94 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 AIFM2Q9BRQ8 373 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 GAL3ST2Q9H3Q3 398 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 CEP295Q9C0D2 2601 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 TNFRSF13BO14836 293 aaPredicted RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 ARG1P05089 322 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 SRP19P09132 144 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 FGF7P21781 194 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 ELLP55199 621 aaPredicted RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 RPS16P62249 146 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 EFNB3Q15768 340 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 FBXL19-AS1Q494R0 122 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 SOHLH1Q5JUK2 328 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 ZNF787Q6DD87 383 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 ETV3LQ6ZN32 361 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 RCC1LQ96I51 464 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 CLCC1Q96S66 551 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 TRAV3A0A0B4J244 114 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 FAM90A27PA6NNH2 459 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 FCN3O75636 299 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 HSPB1P04792 205 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 APOBEC3AP31941 199 aaPredicted RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 RPL31P62899 125 aaKnown RBP8.06□□□□□ -1.12
SMG1-205ENST00000561947 AKIRIN2Q53H80 203 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 SSX7Q7RTT5 188 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 ST6GALNAC3Q8NDV1 305 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 MS4A5Q9H3V2 200 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 SMCO4Q9NRQ5 59 aa8.06□□□□□ -1.12
SMG1-205ENST00000561947 LOC102723971A0A1B0GUV8 181 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 M0R036 132 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 DAOP14920 347 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 VDAC2P45880 294 aaPredicted RBP8.05□□□□□ -1.12
SMG1-205ENST00000561947 RPP30P78346 268 aaKnown RBP8.05□□□□□ -1.12
SMG1-205ENST00000561947 KHDC3LQ587J8 217 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 LCN15Q6UWW0 184 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 ZNF429Q86V71 674 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 RXFP4Q8TDU9 374 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
SMG1-205ENST00000561947 ZNF714Q96N38 554 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 UNKLQ9H9P5 680 aaKnown RBP8.05□□□□□ -1.12
SMG1-205ENST00000561947 RPS10P5Q9NQ39 176 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 ARFGEF3Q5TH69 2177 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 C7orf77A4D0Y5 90 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 C15orf61A6NNL5 157 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 B9A039 149 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 CCL21O00585 134 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 NDUFB3O43676 98 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 SNRNP70P08621 437 aaKnown RBP8.05□□□□□ -1.12
SMG1-205ENST00000561947 MDKP21741 143 aaPredicted RBP8.05□□□□□ -1.12
SMG1-205ENST00000561947 CHRNB4P30926 498 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 TFF3Q07654 80 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 POU2AF1Q16633 256 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 OR4A47Q6IF82 309 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 ACSM6Q6P461 480 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 LYPD2Q6UXB3 125 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 LINC01560Q8TB33 94 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 RHOVQ96L33 236 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 GNG13Q9P2W3 67 aa8.05□□□□□ -1.12
SMG1-205ENST00000561947 MAP1LC3B2A6NCE7 125 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 H7C2Y5 167 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 IGKV1D-33P01593 117 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 IGKV1-33P01594 117 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 CCL3L1P16619 93 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 AKR1C3P42330 323 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 LRRC10Q5BKY1 277 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 TMEM200BQ69YZ2 307 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 HEPN1Q6WQI6 88 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 C20orf24Q9BUV8 137 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 NPCDR1Q9BY65 106 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 MAP1LC3BQ9GZQ8 125 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 HEYLQ9NQ87 328 aaPredicted RBP8.04□□□□□ -1.12
SMG1-205ENST00000561947 TCF19Q9Y242 345 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 FOXA2Q9Y261 457 aaPredicted RBP8.04□□□□□ -1.12
SMG1-205ENST00000561947 TLN1Q9Y490 2541 aaKnown RBP8.04□□□□□ -1.12
SMG1-205ENST00000561947 PLAUP00749 431 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 HRASP01112 189 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 IFNA10P01566 189 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 MBP02144 154 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 CT45A6P0DMU7 189 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 CT45A5P0DMU8 189 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 CT45A7P0DMV0 189 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 PAX6P26367 422 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 FGF8P55075 233 aaPredicted RBP8.04□□□□□ -1.12
SMG1-205ENST00000561947 ERVFRD-1P60508 538 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 HNF4GQ14541 408 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 RHEBQ15382 184 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 H1FXQ92522 213 aaKnown RBP8.04□□□□□ -1.12
SMG1-205ENST00000561947 CISD1Q9NZ45 108 aaKnown RBP8.04□□□□□ -1.12
SMG1-205ENST00000561947 ZNRD1Q9P1U0 126 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 CTSZQ9UBR2 303 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 POLEQ07864 2286 aa8.04□□□□□ -1.12
SMG1-205ENST00000561947 NBEAQ8NFP9 2946 aa8.03□□□□□ -1.12
SMG1-205ENST00000561947 ROS1P08922 2347 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms