RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 RRHO14718 337 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 IGHV3-48P01763 117 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 ECSCRQ19T08 205 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 LRRC75BQ2VPJ9 315 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 TM4SF20Q53R12 229 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 EP300Q09472 2414 aaPredicted RBP8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 MMDQ15546 238 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF124Q15973 351 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 C2orf83Q53S99 150 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 MARCH11A6NNE9 402 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 CCL13Q99616 98 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 A0A087WV48 116 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 IGHV5-10-1A0A0J9YXX1 117 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 ADIPOQQ15848 244 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 OR10AG1Q8NH19 301 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 MARS2Q96GW9 593 aaKnown RBP8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 K7N7A8 449 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 CSRP2Q16527 193 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 FBXW9Q5XUX1 488 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 CLDND2Q8NHS1 167 aa8.74□□□□□ -1.01
GTF3C1-202ENST00000561623 KLF4O43474 513 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 GCHFRP30047 84 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 RND2P52198 227 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 EGR4Q05215 589 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 TFF3Q07654 80 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 KCNMB1Q16558 191 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 NIT1Q86X76 327 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 SLC25A10Q9UBX3 287 aaPredicted RBP8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 RTTNQ86VV8 2226 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 UBE2CO00762 179 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 REG1AP05451 166 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 SMIM13P0DJ93 91 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 JMJD8Q96S16 334 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 F5P12259 2224 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 GDF9O60383 454 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 STPG3Q8N7X2 389 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 NDUFAF3Q9BU61 184 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 CENPVQ7Z7K6 275 aaPredicted RBP8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 RNF126Q9BV68 326 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 INTS1Q8N201 2190 aaKnown RBP8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 CCDC88CQ9P219 2028 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 SCO2A0A1W2PP80 73 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 C8orf88P0DMB2 117 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 RPL31P62899 125 aaKnown RBP8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 MIEN1Q9BRT3 115 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
GTF3C1-202ENST00000561623 IGHV3OR16-10A0A075B7F0 116 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 CEACAM1P13688 526 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 ATP5G3P48201 142 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 LY6G6FQ5SQ64 297 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 RABAC1Q9UI14 185 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 B4E171 279 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 FAM90A26D6RGX4 464 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 ZNF430Q9H8G1 570 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 SDF2L1Q9HCN8 221 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 BEX4Q9NWD9 120 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 C16orf97H3BN30 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 GFI1BQ5VTD9 330 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 OR4D5Q8NGN0 318 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 ANKRD31Q8N7Z5 1873 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 LAMB2P55268 1798 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 A0A087WWC5 75 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BKO60814 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BJP06899 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BOP23527 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BBP33778 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BDP58876 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BCP62807 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST2H2BEQ16778 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 MBNL2Q5VZF2 373 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 OR5R1Q8NH85 324 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BHQ93079 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BNQ99877 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 HIST1H2BMQ99879 126 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 PSMG3Q9BT73 122 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 SOX21Q9Y651 276 aaPredicted RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 NABP2Q9BQ15 211 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 NPCDR1Q9BY65 106 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 IL36BQ9NZH7 164 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 A0A1B0GV72 72 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
GTF3C1-202ENST00000561623 VENTXO95231 258 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 RPL27AP46776 148 aaKnown RBP8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 TFPI2P48307 235 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 SLC22A18ASQ8N1D0 253 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 DRAM1Q8N682 238 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 C18orf15Q96N68 181 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 SERF1AO75920 110 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 SPTBP11277 2137 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 UCP2P55851 309 aa8.71□□□□□ -1.01
GTF3C1-202ENST00000561623 UCP3P55916 312 aa8.71□□□□□ -1.02
GTF3C1-202ENST00000561623 RPL8P62917 257 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms