RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SH2D1BO14796 132 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 PPP1R2P9O14990 202 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 BCL2L11O43521 198 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 CYB5AP00167 134 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 GCGP01275 180 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 OR5AC1P0C628 307 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 NQO2P16083 231 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 CD24P25063 80 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 DUSP1P28562 367 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 BTCP35070 178 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 GLIPR1P48060 266 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 MTCP1P56278 107 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 OR2B8PP59922 312 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 ZP1P60852 638 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 ZNF85Q03923 595 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 CDK5R1Q15078 307 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 RBMS2Q15434 407 aaKnown RBP6.64□□□□□ -1.35
PALB2-202ENST00000561514 ODF4Q2M2E3 257 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 AKIRIN2Q53H80 203 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 UTF1Q5T230 341 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 AKR1C8PQ5T2L2 129 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 LEMD1Q68G75 181 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 GLDNQ6ZMI3 551 aaPredicted RBP6.64□□□□□ -1.35
PALB2-202ENST00000561514 OR2W3Q7Z3T1 314 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 COMMD1Q8N668 190 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 OR51D1Q8NGF3 324 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 OR8J1Q8NGP2 316 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 SAT2Q96F10 170 aaPredicted RBP6.64□□□□□ -1.35
PALB2-202ENST00000561514 KIRREL1Q96J84 757 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 IL4I1Q96RQ9 567 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 MCRIP2Q9BUT9 160 aaKnown RBP6.64□□□□□ -1.35
PALB2-202ENST00000561514 ACTR3CQ9C0K3 210 aaPredicted RBP6.64□□□□□ -1.35
PALB2-202ENST00000561514 C20orf85Q9H1P6 137 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 UQCC1Q9NVA1 299 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 DNAH7Q8WXX0 4024 aa6.64□□□□□ -1.35
PALB2-202ENST00000561514 KBTBD11-OT1A0A1B0GTJ5 212 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 PSMB11A5LHX3 300 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 SH2D7A6NKC9 451 aaPredicted RBP6.63□□□□□ -1.35
PALB2-202ENST00000561514 NPIPB11E5RHQ5 1161 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 SIRPB1O00241 398 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 SLC33A1O00400 549 aaPredicted RBP6.63□□□□□ -1.35
PALB2-202ENST00000561514 ARPC5O15511 151 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 IGHG2P01859 326 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 IFNA6P05013 189 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 FAM106CPP0CH98 169 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
PALB2-202ENST00000561514 MYCNOSP40205 109 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 MTNR1BP49286 362 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR10A3P58181 314 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 NANOS3P60323 173 aaKnown RBP6.63□□□□□ -1.35
PALB2-202ENST00000561514 AESQ08117 197 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 PJVKQ0ZLH3 352 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 EBI3Q14213 229 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 JOSD1Q15040 202 aaPredicted RBP6.63□□□□□ -1.35
PALB2-202ENST00000561514 SLC25A30Q5SVS4 291 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR10K2Q6IF99 312 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 TRAPPC6BQ86SZ2 158 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 C5orf56Q8N8D9 126 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 RNF152Q8N8N0 203 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 Q8NFD4 153 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR10H4Q8NGA5 316 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR4D6Q8NGJ1 314 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR51T1Q8NGJ9 327 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR13C8Q8NGS7 320 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR10R2Q8NGX6 335 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR9G1Q8NH87 305 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 RNF141Q8WVD5 230 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 DPF1Q92782 380 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 SMIM12Q96EX1 92 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 TBX5Q99593 518 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 MFFQ9GZY8 342 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 OR6C3Q9NZP0 311 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 FRRS1LQ9P0K9 344 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 PIPOXQ9P0Z9 390 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 RCC2Q9P258 522 aaKnown RBP6.63□□□□□ -1.35
PALB2-202ENST00000561514 COMMD3Q9UBI1 195 aa6.63□□□□□ -1.35
PALB2-202ENST00000561514 SMCO3A2RU48 225 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 RNF222A6NCQ9 220 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 OR4C45A6NMZ5 311 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 H3BSH0 61 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 DFFBO76075 338 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 BDKRB2P30411 391 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 OR3A4PP47883 348 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 PRRX1P54821 245 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 CD69Q07108 199 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 KIAA0141Q14154 515 aaPredicted RBP6.62□□□□□ -1.35
PALB2-202ENST00000561514 PNLIPRP3Q17RR3 467 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 TP53I3Q53FA7 332 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 RNF144BQ7Z419 303 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 FAM220AQ7Z4H9 259 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 Q8N6K4 173 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 SAMD12Q8N8I0 201 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 OR10AC1Q8NH08 325 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 FGGYQ96C11 551 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 CALYQ9NYX4 217 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 GNG8Q9UK08 70 aa6.62□□□□□ -1.35
PALB2-202ENST00000561514 EXOSC1Q9Y3B2 195 aaKnown RBP6.62□□□□□ -1.35
PALB2-202ENST00000561514 AMMECR1Q9Y4X0 333 aaPredicted RBP6.62□□□□□ -1.35
PALB2-202ENST00000561514 TRAV24A0A0B4J272 114 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms