RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PRELID3BQ9Y3B1 194 aa13.22□□□□□ -0.29
CDC42BPB-208ENST00000561271 TENM3Q9P273 2699 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 A0A0A6YYH2 397 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 MEIS3P1A6NDR6 274 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 MSGN1A6NI15 193 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 A6NJ64 397 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 MPPED1O15442 326 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 AIREO43918 545 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 RBMXL2O75526 392 aaKnown RBP13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 SLC22A5O76082 557 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 SPNP16150 400 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 AADACP22760 399 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 ADAD2Q8NCV1 583 aaKnown RBP13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 OR13F1Q8NGS4 319 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 SECTM1Q8WVN6 248 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 TMEM68Q96MH6 324 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 HSD17B10Q99714 261 aaKnown RBP13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 AUNIPQ9H7T9 357 aa13.21□□□□□ -0.29
CDC42BPB-208ENST00000561271 A0A0G2JLM5 398 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR9G9P0C7N8 305 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 FCGR2CP31995 323 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 DYRK1AQ13627 763 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 HOGA1Q86XE5 327 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 TSPAN14Q8NG11 270 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR4S2Q8NH73 311 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 SNAPC3Q92966 411 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 YIPF6Q96EC8 236 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 RANGRFQ9HD47 186 aaPredicted RBP13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 VCX3AQ9NNX9 186 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 DIABLOQ9NR28 239 aa13.2□□□□□ -0.3
CDC42BPB-208ENST00000561271 A0A087WXM4 84 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 TNFSF12O43508 249 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 CREBL2O60519 120 aaPredicted RBP13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 ACTL6BO94805 426 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 TNFAIP8O95379 198 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 TRBV12-3P01733 135 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 PRH1P02810 166 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 ZP3P21754 424 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 MMD2Q8IY49 270 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR6Q1Q8NGQ2 317 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR4C12Q96R67 309 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 ASCL2Q99929 193 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 RSRP1Q9BUV0 290 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 ADAM30Q9UKF2 790 aa13.19□□□□□ -0.3
CDC42BPB-208ENST00000561271 BRI3O95415 125 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 PPYP01298 95 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 GP9P14770 177 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 RPS19P39019 145 aaKnown RBP13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 BRWD1-AS2P59051 145 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 FXYD4P59646 89 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 UBE2NLQ5JXB2 153 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 MFSD4AQ8N468 514 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 SMAD5-AS1Q9Y6J3 95 aa13.18□□□□□ -0.3
CDC42BPB-208ENST00000561271 KBTBD11O94819 623 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 RHOGP84095 191 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 ZNF45Q02386 682 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 ZNF343Q6P1L6 599 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 ZNF66Q6ZN08 573 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 SSX9Q7RTT3 188 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 TMEM17Q86X19 198 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 CROCCP3Q8IVE0 287 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 SAMD12Q8N8I0 201 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 SPIN2AQ99865 258 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 SPIN2BQ9BPZ2 258 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 ELOVL1Q9BW60 279 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 SLC5A7Q9GZV3 580 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 HUWE1Q7Z6Z7 4374 aaKnown RBP13.17□□□□□ -0.3
CDC42BPB-208ENST00000561271 HMX3A6NHT5 357 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 XRCC3O43542 346 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 TMEM127O75204 238 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR2A4O95047 310 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 SYNJ2BPP57105 145 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 EXOSC2Q13868 293 aaKnown RBP13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 C19orf35Q6ZS72 473 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 PUSL1Q8N0Z8 303 aaKnown RBP13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 USMG5Q96IX5 58 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 WWC2-AS2Q96NR7 200 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR2A7Q96R45 310 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 AKIP1Q9NQ31 210 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 U3KQK5 164 aa13.16□□□□□ -0.3
CDC42BPB-208ENST00000561271 TRIM64CA6NLI5 447 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 TEX22C9J3V5 150 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 KIR2DS2P43631 304 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 CBX5P45973 191 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 TAS2R20P59543 309 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 TMEM69Q5SWH9 247 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 OR5AP2Q8NGF4 316 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 TMEM167AQ8TBQ9 72 aa13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 S100A16Q96FQ6 103 aaKnown RBP13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 FYTTD1Q96QD9 318 aaKnown RBP13.15□□□□□ -0.3
CDC42BPB-208ENST00000561271 A0A1B0GW64 132 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms