RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 AKR1C4P17516 323 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 F2RP25116 425 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 MAS1LP35410 378 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 MECP2P51608 486 aaKnown RBP8.53□□□□□ -1.04
TPM1-229ENST00000561242 UBE2KP61086 200 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 ZNF562Q6V9R5 426 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 TMED4Q7Z7H5 227 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 Q8N9W7 124 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 OR4C16Q8NGL9 310 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 SGMS2Q8NHU3 365 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 MARCH1Q8TCQ1 289 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 MDFIQ99750 246 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 SPIN2AQ99865 258 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 SPIN2BQ9BPZ2 258 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 RSRP1Q9BUV0 290 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 CCDC32Q9BV29 185 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 OR51J1Q9H342 316 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 ZNF702PQ9H963 129 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 PLEKHA2Q9HB19 425 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 COMMD9Q9P000 198 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 CACFD1Q9UGQ2 172 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
TPM1-229ENST00000561242 TRAV41A0A0B4J266 112 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 C3orf85A0A1B0GTC6 90 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 SH2D7A6NKC9 451 aaPredicted RBP8.52□□□□□ -1.05
TPM1-229ENST00000561242 RBFOX2O43251 390 aaKnown RBP eCLIP8.52□□□□□ -1.05
TPM1-229ENST00000561242 CA2P00918 260 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 KRASP01116 189 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 IGHG2P01859 326 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 HLA-DRB1P01911 266 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 IGKV1-16P04430 117 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 DEFA4P12838 97 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 SRPXP78539 464 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 ECSCRQ19T08 205 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 C2orf68Q2NKX9 166 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 UNQ5815/PRO19632Q6UWF5 114 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 ARPC1AQ92747 370 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 R3HDM4Q96D70 268 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 RHOVQ96L33 236 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 SLC2A9Q9NRM0 540 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 SIGLEC9Q9Y336 463 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 AKAP9Q99996 3911 aa8.52□□□□□ -1.05
TPM1-229ENST00000561242 LINC00473A8K010 186 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 NDUFA3O95167 84 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 VAMP1P23763 118 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 CX3CL1P78423 397 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 RBMS2Q15434 407 aaKnown RBP8.51□□□□□ -1.05
TPM1-229ENST00000561242 NSUN5P1Q3KNT7 163 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 Q8N2B8 174 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 STPG2Q8N412 459 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 Q8N6K4 173 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 C11orf44Q8N8P7 122 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 OR4F17Q8NGA8 305 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 OR13C8Q8NGS7 320 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 TMEM56Q96MV1 263 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 FYTTD1Q96QD9 318 aaKnown RBP8.51□□□□□ -1.05
TPM1-229ENST00000561242 OR4F4Q96R69 305 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 SOSTQ9BQB4 213 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 HINT2Q9BX68 163 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 SRRQ9GZT4 340 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 FAM212BQ9NTI7 297 aaPredicted RBP8.51□□□□□ -1.05
TPM1-229ENST00000561242 ZFP57Q9NU63 452 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 PRNDQ9UKY0 176 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 TSSC4Q9Y5U2 329 aaPredicted RBP8.51□□□□□ -1.05
TPM1-229ENST00000561242 WSB1Q9Y6I7 421 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 V9GYH0 126 aa8.51□□□□□ -1.05
TPM1-229ENST00000561242 FAM240BA0A1B0GVZ2 78 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 A0A1W2PN81 502 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 PF4P02776 101 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 PI3P19957 117 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 CNTFRP26992 372 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 CHRNA7P36544 502 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 RPL27AP46776 148 aaKnown RBP8.5□□□□□ -1.05
TPM1-229ENST00000561242 RND3P61587 244 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 RPL8P62917 257 aaKnown RBP8.5□□□□□ -1.05
TPM1-229ENST00000561242 RELBQ01201 579 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
TPM1-229ENST00000561242 FAAP20Q6NZ36 180 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 CENPSQ8N2Z9 138 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 FAM71E2Q8N5Q1 922 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 OR5M8Q8NGP6 311 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 ENKURQ8TC29 256 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 FXYD6Q9H0Q3 95 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 SLC2A8Q9NY64 477 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 THYN1Q9P016 225 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 LINC00527Q9UJ94 153 aa8.5□□□□□ -1.05
TPM1-229ENST00000561242 FN1P02751 2386 aaKnown RBP8.5□□□□□ -1.05
TPM1-229ENST00000561242 A0A0G2JLM5 398 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 C13orf42A0A1B0GVH6 325 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 A0A1W2PRX2 142 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 MSGN1A6NI15 193 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 H0Y980 276 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 KBTBD11O94819 623 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 IFNA21P01568 189 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 IFNA17P01571 189 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 ELANEP08246 267 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 SAA1P0DJI8 122 aaPredicted RBP8.49□□□□□ -1.05
TPM1-229ENST00000561242 IL7P13232 177 aa8.49□□□□□ -1.05
TPM1-229ENST00000561242 HLA-GP17693 338 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms