RNA–Protein interactions for RNA: ENST00000560985.5

TICRR-202, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TICRR, Length 6,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-202ENST00000560985 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 GCHFRP30047 84 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 GPR183P32249 361 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 RPL34P49207 117 aaKnown RBP12.03□□□□□ -0.48
TICRR-202ENST00000560985 TNFSF10P50591 281 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 OTOFQ9HC10 1997 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 CD1AP06126 327 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 HTN3P15516 51 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 CTGFP29279 349 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 H2BFSP57053 126 aa12.03□□□□□ -0.48
TICRR-202ENST00000560985 UPK3AO75631 287 aa12.02□□□□□ -0.48
TICRR-202ENST00000560985 LAMTOR1Q6IAA8 161 aa12.02□□□□□ -0.48
TICRR-202ENST00000560985 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.48
TICRR-202ENST00000560985 PROB1E7EW31 1015 aa12.02□□□□□ -0.48
TICRR-202ENST00000560985 A0A0U1RRA0 63 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 NABP2Q9BQ15 211 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 DANCRP0C864 163 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 CEACAM21Q3KPI0 293 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 CENPVL1A0A0U1RR11 272 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 CGAP01215 116 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 FGF12P61328 243 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 WDYHV1Q96HA8 205 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 VCX2Q9H322 139 aa12.02□□□□□ -0.49
TICRR-202ENST00000560985 C7orf66A4D0T2 115 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 HLA-DQB1P01920 261 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 MALP21145 153 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 PRTN3P24158 256 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 FAM89BQ8N5H3 189 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 WDR34Q96EX3 536 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 RPP25Q9BUL9 199 aaKnown RBP12.01□□□□□ -0.49
TICRR-202ENST00000560985 APC2O95996 2303 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 MS4A5Q9H3V2 200 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 ZNF646O15015 1829 aaPredicted RBP12.01□□□□□ -0.49
TICRR-202ENST00000560985 SLC25A20O43772 301 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 COL9A1P20849 921 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 PSG4Q00888 419 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
TICRR-202ENST00000560985 TRA2AQ13595 282 aaKnown RBP eCLIP12.01□□□□□ -0.49
TICRR-202ENST00000560985 ZIC1Q15915 447 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 VAX1Q5SQQ9 334 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 ITLN1Q8WWA0 313 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 REPIN1Q9BWE0 567 aaKnown RBP12.01□□□□□ -0.49
TICRR-202ENST00000560985 IL36BQ9NZH7 164 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 SSC5DA1L4H1 1573 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 HOXA3O43365 443 aaPredicted RBP12.01□□□□□ -0.49
TICRR-202ENST00000560985 ZNF562Q6V9R5 426 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 DIRC2Q96SL1 478 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 IDI2-AS1Q9NZ38 188 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 PQLC2LA1A4F0 135 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 PEX11BO96011 259 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 SELENOTP62341 195 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 NPIPB3Q92617 1050 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 JMJD8Q96S16 334 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 KNTC1P50748 2209 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 CCL4P13236 92 aa12.01□□□□□ -0.49
TICRR-202ENST00000560985 H3BRM9 83 aa12□□□□□ -0.49
TICRR-202ENST00000560985 ADMP35318 185 aa12□□□□□ -0.49
TICRR-202ENST00000560985 ZNF818PQ6ZRF7 136 aa12□□□□□ -0.49
TICRR-202ENST00000560985 GPR132Q9UNW8 380 aa12□□□□□ -0.49
TICRR-202ENST00000560985 DTX4Q9Y2E6 619 aa12□□□□□ -0.49
TICRR-202ENST00000560985 SLC25A15Q9Y619 301 aa12□□□□□ -0.49
TICRR-202ENST00000560985 SCN8AQ9UQD0 1980 aa12□□□□□ -0.49
TICRR-202ENST00000560985 FAM106AQ4KMX7 169 aa12□□□□□ -0.49
TICRR-202ENST00000560985 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
TICRR-202ENST00000560985 NAA38Q9BRA0 125 aaKnown RBP12□□□□□ -0.49
TICRR-202ENST00000560985 SF3B6Q9Y3B4 125 aaKnown RBP12□□□□□ -0.49
TICRR-202ENST00000560985 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
TICRR-202ENST00000560985 UCP2P55851 309 aa12□□□□□ -0.49
TICRR-202ENST00000560985 ACSF3Q4G176 576 aaPredicted RBP12□□□□□ -0.49
TICRR-202ENST00000560985 NHLRC3Q5JS37 347 aa12□□□□□ -0.49
TICRR-202ENST00000560985 DUX3Q96PT4 197 aa12□□□□□ -0.49
TICRR-202ENST00000560985 SPSB2Q99619 263 aa12□□□□□ -0.49
TICRR-202ENST00000560985 KDM3BQ7LBC6 1761 aa12□□□□□ -0.49
TICRR-202ENST00000560985 A0A1W2PQD3 144 aa12□□□□□ -0.49
TICRR-202ENST00000560985 CD69Q07108 199 aa12□□□□□ -0.49
TICRR-202ENST00000560985 INO80CQ6PI98 192 aaPredicted RBP12□□□□□ -0.49
TICRR-202ENST00000560985 C5orf30Q96GV9 206 aa12□□□□□ -0.49
TICRR-202ENST00000560985 C5orf66Q9H5L9 145 aa12□□□□□ -0.49
TICRR-202ENST00000560985 LAMTOR2Q9Y2Q5 125 aa12□□□□□ -0.49
TICRR-202ENST00000560985 C16orf97H3BN30 126 aa12□□□□□ -0.49
TICRR-202ENST00000560985 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
TICRR-202ENST00000560985 TSPAN7P41732 249 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 TFF3Q07654 80 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 FAM71F2Q6NXP2 309 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 APOBEC4Q8WW27 367 aaKnown RBP11.99□□□□□ -0.49
TICRR-202ENST00000560985 PPP1R3EQ9H7J1 279 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 IGHV3OR16-8A0A075B7F1 116 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 NPPCP23582 126 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 TBR1Q16650 682 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 FBXW9Q5XUX1 488 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 GPBAR1Q8TDU6 330 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 ITLN2Q8WWU7 325 aaPredicted RBP11.99□□□□□ -0.49
TICRR-202ENST00000560985 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 MARCH11A6NNE9 402 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 UCP3P55916 312 aa11.99□□□□□ -0.49
TICRR-202ENST00000560985 SNRPD3P62318 126 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms