RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 HBBP68871 147 aa11.31□□□□□ -0.6
CSPG4P11-201ENST00000560634 LINC01590Q5TEZ4 76 aa11.31□□□□□ -0.6
CSPG4P11-201ENST00000560634 GEMIN7Q9H840 131 aaKnown RBP11.31□□□□□ -0.6
CSPG4P11-201ENST00000560634 PEF1Q9UBV8 284 aaKnown RBP11.31□□□□□ -0.6
CSPG4P11-201ENST00000560634 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 PPP1R17O96001 155 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 IL4P05112 153 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 MBNL2Q5VZF2 373 aaKnown RBP11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 TMEM183AQ8IXX5 376 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 CTHRC1Q96CG8 243 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 GGACTQ9BVM4 153 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 C1QCP02747 245 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 ZNF708P17019 499 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 DLX6P56179 175 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 OR4D5Q8NGN0 318 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 A1L4Q6 167 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 IGHMP01871 453 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 GPX1P07203 203 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 NPPCP23582 126 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 RELQ04864 619 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 NEU1Q99519 415 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 A0A1W2PQM1 296 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 SMIM10L1P0DMW3 83 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 SNAI3Q3KNW1 292 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 KIAA1644Q3SXP7 199 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 ABHD12Q8N2K0 398 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 SMIM10Q96HG1 83 aa11.3□□□□□ -0.6
CSPG4P11-201ENST00000560634 DNAL4O96015 105 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 C10orf128Q5T292 105 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 KLF14Q8TD94 323 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 PPIAL4CA0A0B4J2A2 164 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 DPRXA6NFQ7 191 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 PPIAL4GP0DN37 164 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 ZNF818PQ6ZRF7 136 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 DRAM1Q8N682 238 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 WNT5BQ9H1J7 359 aa11.29□□□□□ -0.6
CSPG4P11-201ENST00000560634 SMIM13P0DJ93 91 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 CLEC7AQ9BXN2 247 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 CBLN4Q9NTU7 201 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 HS3ST3B1Q9Y662 390 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 C7orf71A4D174 169 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 EMP1P54849 157 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 ATP5G2Q06055 141 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 CARHSP1Q9Y2V2 147 aaKnown RBP11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 CGB1A6NKQ9 187 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 GOLT1AQ6ZVE7 132 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 RTN4RQ9BZR6 473 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 ZFC3H1O60293 1989 aaKnown RBP11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 SIGLEC5O15389 551 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 SYNGR3O43761 229 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 RECKO95980 971 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 TFF2Q03403 129 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 ZNF414Q96IQ9 312 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 GP6Q9HCN6 339 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
CSPG4P11-201ENST00000560634 IGKV1D-42A0A075B6H8 117 aa11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 FHL5Q5TD97 284 aa11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 TTC9CQ8N5M4 171 aa11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 PRELID3AQ96N28 172 aa11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 DOCK2Q92608 1830 aa11.27□□□□□ -0.6
CSPG4P11-201ENST00000560634 TRBV20OR9-2A0A075B6H5 130 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 CELA2AP08217 269 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 FADS6Q8N9I5 356 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 RCC1LQ96I51 464 aaKnown RBP11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 WFIKKN1Q96NZ8 548 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 SOX21Q9Y651 276 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 ARAP2Q8WZ64 1704 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 OTX1P32242 354 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 EEF1AKMT3Q96AZ1 226 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 RNF115Q9Y4L5 304 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 KIAA1551Q9HCM1 1747 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 H7C1H1 209 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 ATP5LO75964 103 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 FAM159AQ6UWV7 190 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 SLC22A18ASQ8N1D0 253 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 ARL6IP6Q8N6S5 226 aa11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 OSR1Q8TAX0 266 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P11-201ENST00000560634 TRAV9-1A0A075B6T8 112 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 GRIFINA4D1Z8 144 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 NPIPB7O75200 414 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 BIVMQ86UB2 503 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 WFDC6Q9BQY6 131 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 LINC00470Q9BZP3 86 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 IGKV3D-15A0A087WSY6 115 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 IGKV3-15P01624 115 aa11.26□□□□□ -0.61
CSPG4P11-201ENST00000560634 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms