RNA–Protein interactions for RNA: ENST00000559718.1

USP3-214, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-214ENST00000559718 ARFRP1Q13795 201 aa8.83□□□□□ -1
USP3-214ENST00000559718 TBCEQ15813 527 aaPredicted RBP8.83□□□□□ -1
USP3-214ENST00000559718 VMA21Q3ZAQ7 101 aa8.83□□□□□ -1
USP3-214ENST00000559718 C10orf55Q5SWW7 151 aa8.83□□□□□ -1
USP3-214ENST00000559718 ADAMTSL5Q6ZMM2 481 aa8.83□□□□□ -1
USP3-214ENST00000559718 ZNF367Q7RTV3 350 aa8.83□□□□□ -1
USP3-214ENST00000559718 ACOT12Q8WYK0 555 aa8.83□□□□□ -1
USP3-214ENST00000559718 ISOC1Q96CN7 298 aa8.83□□□□□ -1
USP3-214ENST00000559718 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
USP3-214ENST00000559718 AKIP1Q9NQ31 210 aa8.83□□□□□ -1
USP3-214ENST00000559718 BMPR1BO00238 502 aa8.82□□□□□ -1
USP3-214ENST00000559718 MPPED1O15442 326 aa8.82□□□□□ -1
USP3-214ENST00000559718 OR2A4O95047 310 aa8.82□□□□□ -1
USP3-214ENST00000559718 SAA1P0DJI8 122 aaPredicted RBP8.82□□□□□ -1
USP3-214ENST00000559718 RAB3BP20337 219 aa8.82□□□□□ -1
USP3-214ENST00000559718 EDN2P20800 178 aa8.82□□□□□ -1
USP3-214ENST00000559718 MYL9P24844 172 aa8.82□□□□□ -1
USP3-214ENST00000559718 TALDO1P37837 337 aa8.82□□□□□ -1
USP3-214ENST00000559718 RANBP1P43487 201 aa8.82□□□□□ -1
USP3-214ENST00000559718 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
USP3-214ENST00000559718 RPL30P62888 115 aaKnown RBP8.82□□□□□ -1
USP3-214ENST00000559718 EXOSC2Q13868 293 aaKnown RBP8.82□□□□□ -1
USP3-214ENST00000559718 OR2B11Q5JQS5 317 aa8.82□□□□□ -1
USP3-214ENST00000559718 C22orf42Q6IC83 251 aa8.82□□□□□ -1
USP3-214ENST00000559718 LCN12Q6JVE5 192 aa8.82□□□□□ -1
USP3-214ENST00000559718 Q6ZS49 121 aa8.82□□□□□ -1
USP3-214ENST00000559718 C19orf35Q6ZS72 473 aa8.82□□□□□ -1
USP3-214ENST00000559718 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
USP3-214ENST00000559718 SNAPC3Q92966 411 aa8.82□□□□□ -1
USP3-214ENST00000559718 ADTRPQ96IZ2 230 aa8.82□□□□□ -1
USP3-214ENST00000559718 CNBD2Q96M20 576 aa8.82□□□□□ -1
USP3-214ENST00000559718 SPATA25Q9BR10 227 aa8.82□□□□□ -1
USP3-214ENST00000559718 ATG5Q9H1Y0 275 aa8.82□□□□□ -1
USP3-214ENST00000559718 TUBA4BQ9H853 241 aa8.82□□□□□ -1
USP3-214ENST00000559718 RETNQ9HD89 108 aa8.82□□□□□ -1
USP3-214ENST00000559718 NDUFB11Q9NX14 153 aa8.82□□□□□ -1
USP3-214ENST00000559718 SIGLEC8Q9NYZ4 499 aa8.82□□□□□ -1
USP3-214ENST00000559718 TRBV9A0A0B4J1U6 114 aa8.81□□□□□ -1
USP3-214ENST00000559718 IGKV1D-13A0A0B4J2D9 117 aa8.81□□□□□ -1
USP3-214ENST00000559718 TRDV1A0A1B0GX56 115 aa8.81□□□□□ -1
USP3-214ENST00000559718 METTL21EPA6NDL7 271 aa8.81□□□□□ -1
USP3-214ENST00000559718 FCGR3BO75015 233 aa8.81□□□□□ -1
USP3-214ENST00000559718 IGLV2-14P01704 120 aa8.81□□□□□ -1
USP3-214ENST00000559718 IGKV1-13P0DP09 117 aa8.81□□□□□ -1
USP3-214ENST00000559718 NFYAP23511 347 aaPredicted RBP8.81□□□□□ -1
USP3-214ENST00000559718 ATP5G2Q06055 141 aa8.81□□□□□ -1
USP3-214ENST00000559718 CDK10Q15131 360 aa8.81□□□□□ -1
USP3-214ENST00000559718 TATDN3Q17R31 274 aa8.81□□□□□ -1
USP3-214ENST00000559718 CDNFQ49AH0 187 aa8.81□□□□□ -1
USP3-214ENST00000559718 GTSCR1Q86UQ5 136 aa8.81□□□□□ -1
USP3-214ENST00000559718 Q8N402 240 aa8.81□□□□□ -1
USP3-214ENST00000559718 OSR1Q8TAX0 266 aaPredicted RBP8.81□□□□□ -1
USP3-214ENST00000559718 DCUN1D5Q9BTE7 237 aa8.81□□□□□ -1
USP3-214ENST00000559718 ST6GALNAC5Q9BVH7 336 aa8.81□□□□□ -1
USP3-214ENST00000559718 PLEKHA3Q9HB20 300 aa8.81□□□□□ -1
USP3-214ENST00000559718 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.8□□□□□ -1
USP3-214ENST00000559718 HMX3A6NHT5 357 aa8.8□□□□□ -1
USP3-214ENST00000559718 FAM223BA6NKX1 122 aa8.8□□□□□ -1
USP3-214ENST00000559718 TUSC2O75896 110 aa8.8□□□□□ -1
USP3-214ENST00000559718 OR2J3O76001 311 aa8.8□□□□□ -1
USP3-214ENST00000559718 HLA-AP01891 365 aaKnown RBP8.8□□□□□ -1
USP3-214ENST00000559718 DTYMKP23919 212 aa8.8□□□□□ -1
USP3-214ENST00000559718 CD300EQ496F6 205 aaPredicted RBP8.8□□□□□ -1
USP3-214ENST00000559718 IZUMO2Q6UXV1 221 aa8.8□□□□□ -1
USP3-214ENST00000559718 KCTD9Q7L273 389 aa8.8□□□□□ -1
USP3-214ENST00000559718 FAM223AQ8IWN6 122 aa8.8□□□□□ -1
USP3-214ENST00000559718 TTC9CQ8N5M4 171 aa8.8□□□□□ -1
USP3-214ENST00000559718 ZNF645Q8N7E2 425 aa8.8□□□□□ -1
USP3-214ENST00000559718 NUDCD2Q8WVJ2 157 aa8.8□□□□□ -1
USP3-214ENST00000559718 PEMTQ9UBM1 199 aa8.8□□□□□ -1
USP3-214ENST00000559718 RBMX2Q9Y388 322 aaKnown RBP8.8□□□□□ -1
USP3-214ENST00000559718 OR2W1Q9Y3N9 320 aa8.8□□□□□ -1
USP3-214ENST00000559718 SELENOKQ9Y6D0 94 aa8.8□□□□□ -1
USP3-214ENST00000559718 EPPK1P58107 5090 aaKnown RBP8.8□□□□□ -1
USP3-214ENST00000559718 A0A1B0GW64 132 aa8.79□□□□□ -1
USP3-214ENST00000559718 TMEM235A6NFC5 223 aa8.79□□□□□ -1
USP3-214ENST00000559718 ZNF785A8K8V0 405 aa8.79□□□□□ -1
USP3-214ENST00000559718 TEX22C9J3V5 150 aa8.79□□□□□ -1
USP3-214ENST00000559718 PPP5D1E7EU14 171 aa8.79□□□□□ -1
USP3-214ENST00000559718 E7EUB6 86 aa8.79□□□□□ -1
USP3-214ENST00000559718 ACTL6BO94805 426 aa8.79□□□□□ -1
USP3-214ENST00000559718 HLA-DQB1P01920 261 aa8.79□□□□□ -1
USP3-214ENST00000559718 CD7P09564 240 aa8.79□□□□□ -1
USP3-214ENST00000559718 BRWD1-AS2P59051 145 aa8.79□□□□□ -1
USP3-214ENST00000559718 CD81P60033 236 aa8.79□□□□□ -1
USP3-214ENST00000559718 C15orf32Q32M92 178 aa8.79□□□□□ -1
USP3-214ENST00000559718 HACD4Q5VWC8 232 aa8.79□□□□□ -1
USP3-214ENST00000559718 LINC00322Q6ZN03 302 aaPredicted RBP8.79□□□□□ -1
USP3-214ENST00000559718 MMD2Q8IY49 270 aa8.79□□□□□ -1
USP3-214ENST00000559718 GPHA2Q96T91 129 aa8.79□□□□□ -1
USP3-214ENST00000559718 SPIN2AQ99865 258 aa8.79□□□□□ -1
USP3-214ENST00000559718 SPIN2BQ9BPZ2 258 aa8.79□□□□□ -1
USP3-214ENST00000559718 FAM110AQ9BQ89 295 aa8.79□□□□□ -1
USP3-214ENST00000559718 WFDC10AQ9H1F0 79 aa8.79□□□□□ -1
USP3-214ENST00000559718 HIPK2Q9H2X6 1198 aa8.79□□□□□ -1
USP3-214ENST00000559718 DMRT1Q9Y5R6 373 aa8.79□□□□□ -1
USP3-214ENST00000559718 DNAH1Q9P2D7 4330 aa8.79□□□□□ -1
USP3-214ENST00000559718 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
USP3-214ENST00000559718 RBMY1BA6NDE4 496 aaKnown RBP8.78□□□□□ -1
USP3-214ENST00000559718 RBMY1EA6NEQ0 496 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms