RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 DEFA5Q01523 94 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 CATR1Q13166 79 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 FHL3Q13643 280 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 PRSS8Q16651 343 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 C19orf54Q5BKX5 351 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 GPR107Q5VW38 600 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 SNX29P2Q8IUI4 249 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 MFSD4AQ8N468 514 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 TEX45Q8NA69 505 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 POC5Q8NA72 575 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 OR5AP2Q8NGF4 316 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 OR5H2Q8NGV7 314 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 SNAPC3Q92966 411 aa6.36□□□□□ -1.39
SNX1-207ENST00000559401 MRPS26Q9BYN8 205 aaKnown RBP6.36□□□□□ -1.39
SNX1-207ENST00000559401 NAA50Q9GZZ1 169 aaKnown RBP6.36□□□□□ -1.39
SNX1-207ENST00000559401 ZMAT5Q9UDW3 170 aaKnown RBP6.36□□□□□ -1.39
SNX1-207ENST00000559401 TGP01266 2768 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 IGHV4OR15-8A0A075B7B6 117 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 A0A087WW49 117 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 WI2-2373I1.2A0A1W2PRP0 233 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 MSGN1A6NI15 193 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 LINC01619G3V211 115 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 K7EIL1 84 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 OVOL1O14753 267 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 HPGDSO60760 199 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 LY86O95711 162 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 APOA1P02647 267 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 PMP2P02689 132 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 CRYGBP07316 175 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 ECI1P42126 302 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 RORCP51449 518 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 SSBP2P81877 361 aaPredicted RBP6.35□□□□□ -1.39
SNX1-207ENST00000559401 RUNX1Q01196 453 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 KIAA0141Q14154 515 aaPredicted RBP6.35□□□□□ -1.39
SNX1-207ENST00000559401 RNASE12Q5GAN4 147 aaKnown RBP6.35□□□□□ -1.39
SNX1-207ENST00000559401 C10orf55Q5SWW7 151 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 MZT2AQ6P582 158 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 ZNF66Q6ZN08 573 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 SSX9Q7RTT3 188 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 OVCH2Q7RTZ1 564 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 GPR141Q7Z602 305 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 MMD2Q8IY49 270 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 VKORC1L1Q8N0U8 176 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 SPAG16Q8N0X2 631 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 OR51H1Q8NH63 302 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 VSTM2AQ8TAG5 236 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 SRSF12Q8WXF0 261 aaKnown RBP6.35□□□□□ -1.39
SNX1-207ENST00000559401 AP3S1Q92572 193 aa6.35□□□□□ -1.39
SNX1-207ENST00000559401 ZNF2Q9BSG1 426 aaPredicted RBP6.35□□□□□ -1.39
SNX1-207ENST00000559401 ZNF430Q9H8G1 570 aaPredicted RBP6.35□□□□□ -1.39
SNX1-207ENST00000559401 A0A0G2JLM5 398 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 ANKRD34BA5PLL1 514 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 DPPA5A6NC42 116 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 H3BUA1 57 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 SULT1C2O00338 296 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 SAP30O75446 220 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 KBTBD11O94819 623 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 OR2A4O95047 310 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 GABARAPO95166 117 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 HRASP01112 189 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 IGLV2-14P01704 120 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 OR9G9P0C7N8 305 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 ELK1P19419 428 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 HLA-DMAP28067 261 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 KIR2DS2P43631 304 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 RFX2P48378 723 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 TAS2R46P59540 309 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 TSPAN5P62079 268 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 EGFEM1PQ0D2K5 195 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 ASPHD1Q5U4P2 390 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 AADACL3Q5VUY0 350 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 ANKRD13BQ86YJ7 626 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 ZBTB34Q8NCN2 500 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 GIMAP1Q8WWP7 306 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 DLX4Q92988 240 aaPredicted RBP6.34□□□□□ -1.39
SNX1-207ENST00000559401 BORCS5Q969J3 196 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 RHOVQ96L33 236 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 TMEM68Q96MH6 324 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 FYTTD1Q96QD9 318 aaKnown RBP6.34□□□□□ -1.39
SNX1-207ENST00000559401 OR2A7Q96R45 310 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 PRR25Q96S07 402 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 SPIN2AQ99865 258 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 SPIN2BQ9BPZ2 258 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 HRASLSQ9HDD0 168 aa6.34□□□□□ -1.39
SNX1-207ENST00000559401 RGS5O15539 181 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 RAMP3O60896 148 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 NOL3O60936 208 aaKnown RBP6.33□□□□□ -1.4
SNX1-207ENST00000559401 HSPB1P04792 205 aaKnown RBP6.33□□□□□ -1.4
SNX1-207ENST00000559401 RLN1P04808 185 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 ZNF182P17025 639 aaPredicted RBP6.33□□□□□ -1.4
SNX1-207ENST00000559401 HRH1P35367 487 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 RPL27AP46776 148 aaKnown RBP6.33□□□□□ -1.4
SNX1-207ENST00000559401 EIF4EBP1Q13541 118 aaPredicted RBP6.33□□□□□ -1.4
SNX1-207ENST00000559401 DYRK1AQ13627 763 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 MSMO1Q15800 293 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 CTF1Q16619 201 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 MRGPRG-AS1Q2M3A8 158 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 ZNF818PQ6ZRF7 136 aa6.33□□□□□ -1.4
SNX1-207ENST00000559401 CLVS1Q8IUQ0 354 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms