RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 EFNB3Q15768 340 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 SSX9Q7RTT3 188 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 ZNF429Q86V71 674 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 LYG1Q8N1E2 194 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 AIFM2Q9BRQ8 373 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 PPIAL4AQ9Y536 164 aa13.09□□□□□ -0.31
USP8-208ENST00000559329 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 HSPB1P04792 205 aaKnown RBP13.08□□□□□ -0.32
USP8-208ENST00000559329 SRP19P09132 144 aaKnown RBP13.08□□□□□ -0.32
USP8-208ENST00000559329 NDUFB7P17568 137 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 VDAC2P45880 294 aaPredicted RBP13.08□□□□□ -0.32
USP8-208ENST00000559329 POU2AF1Q16633 256 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 AWAT1Q58HT5 328 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 ETV3LQ6ZN32 361 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 OR4A16Q8NH70 328 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
USP8-208ENST00000559329 ADGRG4Q8IZF6 3080 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 ROS1P08922 2347 aa13.08□□□□□ -0.32
USP8-208ENST00000559329 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.07□□□□□ -0.32
USP8-208ENST00000559329 OR13C7P0DN81 318 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 PAX6P26367 422 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 CASP6P55212 293 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 KLRB1Q12918 225 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 HAGHQ16775 308 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 ST6GALNAC3Q8NDV1 305 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 GAL3ST2Q9H3Q3 398 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 DOCK11Q5JSL3 2073 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 IFNA17P01571 189 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 IGKV1D-33P01593 117 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 IGKV1-33P01594 117 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 GNG10P50151 68 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 RPL31P62899 125 aaKnown RBP13.07□□□□□ -0.32
USP8-208ENST00000559329 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 CCL17Q92583 94 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 SMCO4Q9NRQ5 59 aa13.07□□□□□ -0.32
USP8-208ENST00000559329 C7orf77A4D0Y5 90 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 C15orf61A6NNL5 157 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 CD3EP07766 207 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
USP8-208ENST00000559329 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 ZNF787Q6DD87 383 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 ACSM6Q6P461 480 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 HEPN1Q6WQI6 88 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 MS4A5Q9H3V2 200 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 DYNLRB1Q9NP97 96 aa13.06□□□□□ -0.32
USP8-208ENST00000559329 IL6RP08887 468 aaPredicted RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 CT45A6P0DMU7 189 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 CT45A5P0DMU8 189 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 CT45A7P0DMV0 189 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 DAOP14920 347 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 FGF7P21781 194 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 CHRNB4P30926 498 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 ELLP55199 621 aaPredicted RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 TFF3Q07654 80 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 TMEM200BQ69YZ2 307 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 OR4A47Q6IF82 309 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 LYPD2Q6UXB3 125 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 OR10G4Q8NGN3 311 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 RHOVQ96L33 236 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 TMEM14BQ9NUH8 114 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 KAAG1Q9UBP8 84 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 CTSZQ9UBR2 303 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 FOXA2Q9Y261 457 aaPredicted RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 TET2Q6N021 2002 aaPredicted RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 COLCA2A8K830 154 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 B9A039 149 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 PMS2P11Q13670 270 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 RHEBQ15382 184 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 LCN15Q6UWW0 184 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 ZNF833PQ6ZTB9 187 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 Q8N7P7 452 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 RXFP4Q8TDU9 374 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 ZNF714Q96N38 554 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 NPCDR1Q9BY65 106 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
USP8-208ENST00000559329 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 TCF19Q9Y242 345 aa13.05□□□□□ -0.32
USP8-208ENST00000559329 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 BCL2P10415 239 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 CCL3L1P16619 93 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 ERVFRD-1P60508 538 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 LINC01560Q8TB33 94 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 TMEM170AQ8WVE7 144 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 RPS10P5Q9NQ39 176 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
USP8-208ENST00000559329 KALRNO60229 2985 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 PKDREJQ9NTG1 2253 aa13.04□□□□□ -0.32
USP8-208ENST00000559329 MAP1LC3B2A6NCE7 125 aa13.03□□□□□ -0.32
USP8-208ENST00000559329 FAM90A27PA6NNH2 459 aa13.03□□□□□ -0.32
USP8-208ENST00000559329 SIAH2O43255 324 aa13.03□□□□□ -0.32
USP8-208ENST00000559329 PLAUP00749 431 aa13.03□□□□□ -0.32
USP8-208ENST00000559329 GRNP28799 593 aaKnown RBP13.03□□□□□ -0.32
USP8-208ENST00000559329 AKR1C3P42330 323 aa13.03□□□□□ -0.32
USP8-208ENST00000559329 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms