RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SNRNP70P08621 437 aaKnown RBP9.3□□□□□ -0.92
CLPX-204ENST00000559152 FGF7P21781 194 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 RBMS3Q6XE24 437 aaKnown RBP9.3□□□□□ -0.92
CLPX-204ENST00000559152 TCF23Q7RTU1 214 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
CLPX-204ENST00000559152 RCC1LQ96I51 464 aaKnown RBP9.3□□□□□ -0.92
CLPX-204ENST00000559152 P2RX4Q99571 388 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 DYNLRB1Q9NP97 96 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 SLC39A9Q9NUM3 307 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 NDUFA2O43678 99 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 MPDU1O75352 247 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 OR2B8PP59922 312 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 RAB11AP62491 216 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 RELBQ01201 579 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 EFNB3Q15768 340 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 POU2AF1Q16633 256 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 AKIRIN2Q53H80 203 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 AVPI1Q5T686 147 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 DUX4L9Q6RFH8 374 aaPredicted RBP9.29□□□□□ -0.92
CLPX-204ENST00000559152 SLC25A48Q6ZT89 311 aaKnown RBP9.29□□□□□ -0.92
CLPX-204ENST00000559152 SSX9Q7RTT3 188 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 RXFP4Q8TDU9 374 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 HEYLQ9NQ87 328 aaPredicted RBP9.29□□□□□ -0.92
CLPX-204ENST00000559152 TMEM106BQ9NUM4 274 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 GNG13Q9P2W3 67 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 PTPRQQ9UMZ3 2332 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 MAP1LC3B2A6NCE7 125 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 NDUFB3O43676 98 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 IFNA10P01566 189 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 IGHV3-7P01780 117 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 ARG1P05089 322 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 CD3EP07766 207 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 BCL2P10415 239 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 APOBEC3AP31941 199 aaPredicted RBP9.29□□□□□ -0.92
CLPX-204ENST00000559152 RPL31P62899 125 aaKnown RBP9.29□□□□□ -0.92
CLPX-204ENST00000559152 RTL8BQ17RB0 113 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 LRRC10Q5BKY1 277 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 LCN15Q6UWW0 184 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 NIPSNAP3BQ9BS92 247 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 NPCDR1Q9BY65 106 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 MAP1LC3BQ9GZQ8 125 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
CLPX-204ENST00000559152 MAP1BP46821 2468 aaKnown RBP9.29□□□□□ -0.92
CLPX-204ENST00000559152 C15orf61A6NNL5 157 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 COLCA2A8K830 154 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 SHISA9B4DS77 424 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 B9A039 149 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 FOLR2P14207 255 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 CTRB1P17538 263 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 ELLP55199 621 aaPredicted RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 KLRB1Q12918 225 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 FBXL19-AS1Q494R0 122 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 RNF212Q495C1 297 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 CTRB2Q6GPI1 263 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 HEPN1Q6WQI6 88 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 CCL17Q92583 94 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 RHOVQ96L33 236 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 ZNF714Q96N38 554 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 ACTR3CQ9C0K3 210 aaPredicted RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 VSIRQ9H7M9 311 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 ENY2Q9NPA8 101 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 FOXA2Q9Y261 457 aaPredicted RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 PUS1Q9Y606 427 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLPX-204ENST00000559152 TPRP12270 2363 aaKnown RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 CTXND1A0A1B0GTU2 59 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 CYB5BO43169 146 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 NDUFS6O75380 124 aaKnown RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 MT-ND4LP03901 98 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 MDKP21741 143 aaPredicted RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 CD1BP29016 333 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 CA7P43166 264 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 VDAC2P45880 294 aaPredicted RBP9.28□□□□□ -0.92
CLPX-204ENST00000559152 GNG10P50151 68 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 SLC35E3Q7Z769 313 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 ZNF383Q8NA42 475 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 OR10G9Q8NGN4 311 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 OR10G7Q8NGN6 311 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 LHX4Q969G2 390 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 KAAG1Q9UBP8 84 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 PRNDQ9UKY0 176 aa9.28□□□□□ -0.92
CLPX-204ENST00000559152 BSNQ9UPA5 3926 aa9.27□□□□□ -0.92
CLPX-204ENST00000559152 A0A1W2PPE3 182 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 E7EQL1 145 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 H3BQ15 152 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 HOXA1P49639 335 aaPredicted RBP9.27□□□□□ -0.93
CLPX-204ENST00000559152 ATP5IP56385 69 aaPredicted RBP9.27□□□□□ -0.93
CLPX-204ENST00000559152 HSPE1P61604 102 aaKnown RBP9.27□□□□□ -0.93
CLPX-204ENST00000559152 ACOT6Q3I5F7 207 aaPredicted RBP9.27□□□□□ -0.93
CLPX-204ENST00000559152 SPINK9Q5DT21 86 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 OR4A47Q6IF82 309 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 ETV3LQ6ZN32 361 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 RPP25LQ8N5L8 163 aaKnown RBP9.27□□□□□ -0.93
CLPX-204ENST00000559152 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 C8orf31Q8N9H6 132 aa9.27□□□□□ -0.93
CLPX-204ENST00000559152 TVP23CQ96ET8 276 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms