RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 SULT1A1P50225 295 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 EDDM3AQ14507 147 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 PEA15Q15121 130 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 GUK1Q16774 197 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 STX12Q86Y82 276 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 TMEM217Q8N7C4 229 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 C5orf30Q96GV9 206 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 FAM234AQ9H0X4 552 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR2D2Q9H210 308 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 COA4Q9NYJ1 87 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 A0A1B0GW64 132 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 TOR1AO14656 332 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 FAM213BQ8TBF2 198 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 MRGPRDQ8TDS7 321 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 RFNGQ9Y644 331 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 KPTNQ9Y664 436 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 DSCAML1Q8TD84 2053 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 C22orf46C9J442 243 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 FAM90A26D6RGX4 464 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 MGST3O14880 152 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 DFFBO76075 338 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 TAS2R30P59541 319 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 LOXL1Q08397 574 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 SMUG1Q53HV7 270 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 LRRC10Q5BKY1 277 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 TMEM88Q6PEY1 159 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 TRAT1Q6PIZ9 186 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 TCF23Q7RTU1 214 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR13A1Q8NGR1 328 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 HIPK2Q9H2X6 1198 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 CLN8Q9UBY8 286 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 MMP24Q9Y5R2 645 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 ACANP16112 2415 aa12.97□□□□□ -0.33
CDC42BPB-204ENST00000559043 P0C879 139 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 GNB2P62879 340 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 LCN2P80188 198 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 HTD2P86397 168 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 PAX2Q02962 417 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 FAM53AQ6NSI3 398 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 RNF150Q9ULK6 438 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
CDC42BPB-204ENST00000559043 C15orf65H3BRN8 121 aa12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 SSTR5P35346 364 aa12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 EDDM3BP56851 147 aa12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 RPL30P62888 115 aaKnown RBP12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 CBLN2Q8IUK8 224 aa12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 TCTEX1D1Q8N7M0 179 aa12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 H1FXQ92522 213 aaKnown RBP12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 LPAR2Q9HBW0 351 aa12.96□□□□□ -0.34
CDC42BPB-204ENST00000559043 H3BP45 60 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 RAMP3O60896 148 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 PPP1CCP36873 323 aaKnown RBP12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 CR1LQ2VPA4 569 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 TMEM200BQ69YZ2 307 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 SPSB3Q6PJ21 355 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 ABHD14AQ9BUJ0 271 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 SMDT1Q9H4I9 107 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 CREBBPQ92793 2442 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 WNK2Q9Y3S1 2297 aa12.95□□□□□ -0.34
CDC42BPB-204ENST00000559043 BTBD17A6NE02 478 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 PPT1P50897 306 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 BRWD1-AS2P59051 145 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 ERVFRD-1P60508 538 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 CATR1Q13166 79 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 DPPA3Q6W0C5 159 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 PPP1R35Q8TAP8 253 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 RAB39BQ96DA2 213 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 C1orf159Q96HA4 380 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 EIF5A2Q9GZV4 153 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 RPUSD1Q9UJJ7 312 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 ODAMA1E959 279 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 SPINT2O43291 252 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 RPL31P62899 125 aaKnown RBP12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 RUNX1Q01196 453 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 ZNF66Q6ZN08 573 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 LY6G5BQ8NDX9 201 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 AGMATQ9BSE5 352 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 CSPG4Q6UVK1 2322 aa12.94□□□□□ -0.34
CDC42BPB-204ENST00000559043 ABCA1O95477 2261 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 IFNA5P01569 189 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 CGB3P0DN86 165 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 CGB7P0DN87 165 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 IAPPP10997 89 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 GZMHP20718 246 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 NFYBP25208 207 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 FAM216AQ8WUB2 273 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 HSPB7Q9UBY9 170 aa12.93□□□□□ -0.34
CDC42BPB-204ENST00000559043 LOC105371242A0A075B767 164 aa12.92□□□□□ -0.34
CDC42BPB-204ENST00000559043 SMAD7O15105 426 aaKnown RBP12.92□□□□□ -0.34
CDC42BPB-204ENST00000559043 UBE2KP61086 200 aa12.92□□□□□ -0.34
CDC42BPB-204ENST00000559043 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
CDC42BPB-204ENST00000559043 ARL16Q0P5N6 197 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms