RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 OR2D3Q8NGH3 330 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 OR4C16Q8NGL9 310 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 OR5C1Q8NGR4 320 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 C12orf43Q96C57 262 aaKnown RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 CPNE2Q96FN4 548 aaPredicted RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 CAPZA3Q96KX2 299 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 PECRQ9BY49 303 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 VPS29Q9UBQ0 182 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 HHLA2Q9UM44 414 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 SNX12Q9UMY4 172 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 CCL26Q9Y258 94 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 DICER1Q9UPY3 1922 aaKnown RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 SLX4Q8IY92 1834 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 TMED7-TICAM2A0A0A6YYA0 188 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 DHRS12A0PJE2 317 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CLDN24A6NM45 220 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 KPNA3O00505 521 aaPredicted RBP1.06□□□□□ -2.24
VPS13C-207ENST00000558919 UBE2L6O14933 153 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 IFNA6P05013 189 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CTXN2P0C2S0 81 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 OR5G3P0C626 314 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 FAM228BP0C875 321 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 ESDP10768 282 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CD79AP11912 226 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CPMP14384 443 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 SLC25A16P16260 332 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 ALOX5APP20292 161 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 HSD11B1P28845 292 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 MAP2K4P45985 399 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 DAPP51397 102 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 RWDD2BP57060 319 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 LSM6P62312 80 aaKnown RBP1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CCL7P80098 99 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 HOXC5Q00444 222 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 FABP9Q0Z7S8 132 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 FOXF1Q12946 379 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 SRSF6Q13247 344 aaKnown RBP1.06□□□□□ -2.24
VPS13C-207ENST00000558919 TMED2Q15363 201 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 PLPPR5Q32ZL2 321 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 FAM229BQ4G0N7 80 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 C5orf46Q6UWT4 87 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 AMTNQ6UX39 209 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 C1orf174Q8IYL3 243 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CLDN22Q8N7P3 220 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 OR11H1Q8NG94 326 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 OR5B17Q8NGF7 314 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 OR2T27Q8NH04 317 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 OR10A6Q8NH74 314 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 CDC26Q8NHZ8 85 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 MGLLQ99685 303 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 MND1Q9BWT6 205 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 NKX6-2Q9C056 277 aaPredicted RBP1.06□□□□□ -2.24
VPS13C-207ENST00000558919 C11orf1Q9H5F2 150 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 IL20Q9NYY1 176 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 KIF15Q9NS87 1388 aa1.06□□□□□ -2.24
VPS13C-207ENST00000558919 SNAPC4Q5SXM2 1469 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 SLIT2O94813 1529 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 IGHV3-73A0A0B4J1V6 119 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 GRIFINA4D1Z8 144 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 OR6C6A6NF89 314 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 SMIM9A6NGZ8 99 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 OR4C45A6NMZ5 311 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 KNCNA6PVL3 124 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 EEF1E1-BLOC1S5C9J1V9 151 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 LY6LH3BQJ8 138 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 PSMD12O00232 456 aaPredicted RBP1.05□□□□□ -2.24
VPS13C-207ENST00000558919 LY6HO94772 140 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 APOMO95445 188 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 CCL1P22362 96 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 NPPCP23582 126 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 GABRA4P48169 554 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 OR4D2P58180 307 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 TSPEAR-AS2P59090 65 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 PSME3P61289 254 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 RANP62826 216 aaKnown RBP1.05□□□□□ -2.24
VPS13C-207ENST00000558919 CAV1Q03135 178 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 PMAIP1Q13794 54 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 FAM201AQ5SY85 155 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 RASL11AQ6T310 242 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 GLT6D1Q7Z4J2 308 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 LRRC25Q8N386 305 aaPredicted RBP1.05□□□□□ -2.24
VPS13C-207ENST00000558919 DEFB125Q8N687 156 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 DAND5Q8N907 189 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 OR1L8Q8NGR8 309 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 FNDC9Q8TBE3 224 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 RAB2BQ8WUD1 216 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 ANKRD7Q92527 254 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 SLC35B4Q969S0 331 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 GNPNAT1Q96EK6 184 aaPredicted RBP1.05□□□□□ -2.24
VPS13C-207ENST00000558919 DCUN1D1Q96GG9 259 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 PRAP1Q96NZ9 151 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 OR52E6Q96RD3 313 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 C16orf95Q9H693 158 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 CXorf21Q9HAI6 301 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 GPR84Q9NQS5 396 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 TXNL4BQ9NX01 149 aaKnown RBP1.05□□□□□ -2.24
VPS13C-207ENST00000558919 ANAPC10Q9UM13 185 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 ARL2BPQ9Y2Y0 163 aa1.05□□□□□ -2.24
VPS13C-207ENST00000558919 PXMP4Q9Y6I8 212 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms