RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 TRBV9A0A0B4J1U6 114 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 LOC102723971A0A1B0GUV8 181 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 TMEM213A2RRL7 107 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 CGB1A6NKQ9 187 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 FAM223BA6NKX1 122 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 H0YIZ8 118 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 LGALS9O00182 355 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 UBE2CO00762 179 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 ITGB1BP1O14713 200 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 PDCD6O75340 191 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 CRTAPO75718 401 aaPredicted RBP4□□□□□ -1.77
LRRC28-208ENST00000558771 APOA2P02652 100 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 IFNA4P05014 189 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 IL6RP08887 468 aaPredicted RBP4□□□□□ -1.77
LRRC28-208ENST00000558771 OR9G9P0C7N8 305 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 MGMTP16455 207 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 CTRB1P17538 263 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 CAPGP40121 348 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 GBX2P52951 348 aaPredicted RBP4□□□□□ -1.77
LRRC28-208ENST00000558771 RBMS2Q15434 407 aaKnown RBP4□□□□□ -1.77
LRRC28-208ENST00000558771 ATP6AP1Q15904 470 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 MRGPRG-AS1Q2M3A8 158 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 ANKRD55Q3KP44 614 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 C4orf46Q504U0 113 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 HSP90B2PQ58FF3 399 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 SLC25A30Q5SVS4 291 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 AWAT2Q6E213 333 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 SUMO4Q6EEV6 95 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 XAF1Q6GPH4 301 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 CTRB2Q6GPI1 263 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 BTNL8Q6UX41 500 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 FAM223AQ8IWN6 122 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 OR2C3Q8N628 320 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 GVQW1Q8N7I0 195 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 OR13C5Q8NGS8 318 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 C2CD4CQ8TF44 421 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 TRUB1Q8WWH5 349 aaKnown RBP4□□□□□ -1.77
LRRC28-208ENST00000558771 THRSPQ92748 146 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 FAM46BQ96A09 425 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 MYCBPQ99417 103 aaPredicted RBP4□□□□□ -1.77
LRRC28-208ENST00000558771 SLC35D1Q9NTN3 355 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 IMPAD1Q9NX62 359 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 ABRACLQ9P1F3 81 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 AASSQ9UDR5 926 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 UBQLN2Q9UHD9 624 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 APLNQ9ULZ1 77 aa4□□□□□ -1.77
LRRC28-208ENST00000558771 TRAV8-7A0A075B6U6 113 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 KIR2DL5BA0A0G2JN68 375 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 KIR2DL5BA0A0G2JPC4 375 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 SRRM4A7MD48 611 aaKnown RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 IGLL5B9A064 214 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 RTL8CO15255 209 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 GGCTO75223 188 aaKnown RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 OR2J3O76001 311 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 IGHV3-23P01764 117 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 RPL35AP18077 110 aaKnown RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 FCGR2BP31994 310 aaPredicted RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 CEACAM6P40199 344 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 TCTAP57738 103 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 SNRPGP62308 76 aaKnown RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 TNXAQ16473 311 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 C15orf32Q32M92 178 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 ZIK1Q3SY52 487 aaPredicted RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 MEDAGQ5VYS4 303 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 RPL22L1Q6P5R6 122 aaKnown RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 ZNF880Q6PDB4 577 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 GPHB5Q86YW7 130 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 KIR2DL5AQ8N109 375 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 JAGN1Q8N5M9 183 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 UXS1Q8NBZ7 420 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 OR1L6Q8NGR2 347 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 KIR2DL5BQ8NHK3 375 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 C11orf45Q8TAV5 145 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 SETD6Q8TBK2 473 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 SRSF12Q8WXF0 261 aaKnown RBP3.99□□□□□ -1.77
LRRC28-208ENST00000558771 HARBI1Q96MB7 349 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 FAAP24Q9BTP7 215 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 MFFQ9GZY8 342 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 MED4Q9NPJ6 270 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 OR1A1Q9P1Q5 309 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 POMPQ9Y244 141 aa3.99□□□□□ -1.77
LRRC28-208ENST00000558771 TRAV25A0A0B4J276 109 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 TRBV5-5A0A0J9YX44 114 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 ZNF320A2RRD8 509 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 SNTNA6NMZ2 147 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 A8MWP6 167 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 M0R1X1 148 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 S1PR2O95136 353 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 NAPSAO96009 420 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 LIMS3P0CW19 117 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 LIMS4P0CW20 117 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 GABRB1P18505 474 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 ZBTB25P24278 435 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 ARL3P36405 182 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 MAP2K4P45985 399 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 MFAP2P55001 183 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 PRSS8Q16651 343 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 ODF3L2Q3SX64 289 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 FAM106AQ4KMX7 169 aa3.98□□□□□ -1.77
LRRC28-208ENST00000558771 FAM209BQ5JX69 171 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms