RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TNFRSF1AP19438 455 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 REG1BP48304 166 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 ERVK-16P61578 105 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 ABHD12Q8N2K0 398 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 ZNF383Q8NA42 475 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 MLXQ9UH92 298 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 RALYQ9UKM9 306 aaKnown RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 TET2Q6N021 2002 aaPredicted RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 ARFGEF3Q5TH69 2177 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 A0A1W2PPH5 198 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 RRHO14718 337 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 CRYBA1P05813 215 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 SRP19P09132 144 aaKnown RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 COL8A2P25067 703 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 DLX1P56177 255 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 TMPRSS3P57727 454 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 RBPJQ06330 500 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 CDSNQ15517 529 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 DMRTC2Q8IXT2 367 aaPredicted RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 RPP25LQ8N5L8 163 aaKnown RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 ZNF251Q9BRH9 671 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 SAV1Q9H4B6 383 aaPredicted RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 HEYLQ9NQ87 328 aaPredicted RBP8.68□□□□□ -1.02
TPM1-210ENST00000558264 IDI2-AS1Q9NZ38 188 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 LAMP3Q9UQV4 416 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 ABCA4P78363 2273 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 DCHS2Q6V1P9 2916 aa8.68□□□□□ -1.02
TPM1-210ENST00000558264 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 RPL31P62899 125 aaKnown RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 GCSAMLQ5JQS6 135 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 DDB2Q92466 427 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 RHOVQ96L33 236 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 NKX6-3A6NJ46 265 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 COLCA2A8K830 154 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 ZNF727A8MUV8 499 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 NQO2P16083 231 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 RAB11AP62491 216 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 RELBQ01201 579 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 TMEM41BQ5BJD5 291 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 TEX36Q5VZQ5 186 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 SP5Q6BEB4 398 aaPredicted RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 RNASE6Q93091 150 aaKnown RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 TMEM147Q9BVK8 224 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 SMCO4Q9NRQ5 59 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 NDRG3Q9UGV2 375 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 PPIAL4EA0A075B759 164 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 PPIAL4DF5H284 164 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 H3BQ15 152 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 TMEM178BH3BS89 294 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 PPIAL4FP0DN26 164 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 HOXA1P49639 335 aaPredicted RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 FFAR4Q5NUL3 377 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 OR4A47Q6IF82 309 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 TCTEX1D1Q8N7M0 179 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 ZNF439Q8NDP4 499 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 GATAD1Q8WUU5 269 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 ZCCHC14Q8WYQ9 949 aaKnown RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 PSMG3Q9BT73 122 aaPredicted RBP8.67□□□□□ -1.02
TPM1-210ENST00000558264 TMEM106BQ9NUM4 274 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 PPIAL4AQ9Y536 164 aa8.67□□□□□ -1.02
TPM1-210ENST00000558264 hCG_1809904A0A1W2PP81 198 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 A0A1W2PR64 198 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 A0A1W2PRV1 198 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 BTBD17A6NE02 478 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 HBE1P02100 147 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 RAB7AP51149 207 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 DIAPH2-AS1Q14236 149 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 ZNF506Q5JVG8 444 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 FAM122CQ6P4D5 195 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 OR4S2Q8NH73 311 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 LHX4Q969G2 390 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 CIB3Q96Q77 187 aaPredicted RBP8.66□□□□□ -1.02
TPM1-210ENST00000558264 NPCDR1Q9BY65 106 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 CTSZQ9UBR2 303 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 TACC2O95359 2948 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 TRAV38-1A0A0B4J264 116 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 LOC102723971A0A1B0GUV8 181 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 hADV38S2A0JD32 116 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 ZNF729A6NN14 1252 aaPredicted RBP8.66□□□□□ -1.02
TPM1-210ENST00000558264 CCL21O00585 134 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 OR8U8P0C7N1 319 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 TMEM200BQ69YZ2 307 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 ZNF429Q86V71 674 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 FAM24BQ8N5W8 94 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 TMEM170AQ8WVE7 144 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 PINX1Q96BK5 328 aaKnown RBP8.66□□□□□ -1.02
TPM1-210ENST00000558264 RAB39BQ96DA2 213 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 VKORC1Q9BQB6 163 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 EGLN1Q9GZT9 426 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 SEBOXQ9HB31 216 aaPredicted RBP8.66□□□□□ -1.02
TPM1-210ENST00000558264 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 RPUSD1Q9UJJ7 312 aaKnown RBP8.66□□□□□ -1.02
TPM1-210ENST00000558264 TCF19Q9Y242 345 aa8.66□□□□□ -1.02
TPM1-210ENST00000558264 TNCP24821 2201 aa8.65□□□□□ -1.02
TPM1-210ENST00000558264 A0A1B0GW64 132 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms