RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 PMP2P02689 132 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 RLN1P04808 185 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 GLAP06280 429 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 ANXA7P20073 488 aaKnown RBP5.95□□□□□ -1.46
SPG11-205ENST00000558080 IL3RAP26951 378 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 ECI1P42126 302 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 OR3A3P47888 321 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 EBI3Q14213 229 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 FCN2Q15485 313 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 ZFP69Q49AA0 526 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 SCGB2B2Q4G0G5 96 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 TRAT1Q6PIZ9 186 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 Q6ZPA2 131 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 SLC25A48Q6ZT89 311 aaKnown RBP5.95□□□□□ -1.46
SPG11-205ENST00000558080 C18orf65Q6ZTR6 163 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 SLC35E3Q7Z769 313 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 TGIF2LXQ8IUE1 241 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 C8orf31Q8N9H6 132 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 ZNF439Q8NDP4 499 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 WFDC9Q8NEX5 89 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 BEST4Q8NFU0 473 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 OR5AP2Q8NGF4 316 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 OR52L2PQ8NGH6 319 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 OR2T10Q8NGZ9 312 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 MRAPQ8TCY5 172 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 RTN4IP1Q8WWV3 396 aaPredicted RBP5.95□□□□□ -1.46
SPG11-205ENST00000558080 SNAPC3Q92966 411 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 ST6GALNAC6Q969X2 333 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 SCGB3A2Q96PL1 93 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 FAAP24Q9BTP7 215 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 ST6GALNAC5Q9BVH7 336 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 TAF9BQ9HBM6 251 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 KCNIP1Q9NZI2 227 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 AK3Q9UIJ7 227 aa5.95□□□□□ -1.46
SPG11-205ENST00000558080 COL7A1Q02388 2944 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 MOSP00540 346 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 IGHG2P01859 326 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 FCGR3AP08637 254 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 SULT1A3P0DMM9 295 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 SULT1A4P0DMN0 295 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 ANXA3P12429 323 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 CD1BP29016 333 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 PPP1CCP36873 323 aaKnown RBP5.94□□□□□ -1.46
SPG11-205ENST00000558080 TAS2R31P59538 309 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 ARPC4P59998 168 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 TSPAN5P62079 268 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 RPL23AP62750 156 aaKnown RBP5.94□□□□□ -1.46
SPG11-205ENST00000558080 GNMTQ14749 295 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 CDK10Q15131 360 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 MORN2Q502X0 79 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 C4orf46Q504U0 113 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 FOXRED2Q8IWF2 684 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 GAPTQ8N292 157 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 Q8N6K4 173 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 Q8N9W7 124 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 OR13C8Q8NGS7 320 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 MRPL30Q8TCC3 161 aaKnown RBP5.94□□□□□ -1.46
SPG11-205ENST00000558080 SULT4A1Q9BR01 284 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 SEC22CQ9BRL7 303 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 CHMP1AQ9HD42 196 aaPredicted RBP5.94□□□□□ -1.46
SPG11-205ENST00000558080 RANGRFQ9HD47 186 aaPredicted RBP5.94□□□□□ -1.46
SPG11-205ENST00000558080 RAB9BQ9NP90 201 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 C12orf4Q9NQ89 552 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 OR2S2Q9NQN1 319 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 NECAP2Q9NVZ3 263 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
SPG11-205ENST00000558080 EHFQ9NZC4 300 aa5.94□□□□□ -1.46
SPG11-205ENST00000558080 C1QBP02746 253 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 GPR12P47775 334 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 F2RL1P55085 397 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 UBE2MP61081 183 aaKnown RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 SLC35B1P78383 322 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 SURF2Q15527 256 aaPredicted RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 SRSF7Q16629 238 aaKnown RBP eCLIP5.93□□□□□ -1.46
SPG11-205ENST00000558080 TMEM30BQ3MIR4 351 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 Q3ZCU0 254 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 ETV3LQ6ZN32 361 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 Q6ZS49 121 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 TMED4Q7Z7H5 227 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 NOXA1Q86UR1 476 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 SLC25A42Q86VD7 318 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 STPG2Q8N412 459 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 KLHL30-AS1Q8NEE0 82 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 OR11H7Q8NGC8 314 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 TERB2Q8NHR7 220 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 ZNF431Q8TF32 576 aaPredicted RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 ASB13Q8WXK3 278 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 S1PR3Q99500 378 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 RASL11BQ9BPW5 248 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 HDHD3Q9BSH5 251 aaPredicted RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 RIMS4Q9H426 269 aaPredicted RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 PLSCR3Q9NRY6 295 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 LIN7CQ9NUP9 197 aaKnown RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 ZNF230Q9UIE0 474 aaPredicted RBP5.93□□□□□ -1.46
SPG11-205ENST00000558080 ANXA10Q9UJ72 324 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
SPG11-205ENST00000558080 TRBV6-6A0A0A6YYG2 114 aa5.92□□□□□ -1.46
SPG11-205ENST00000558080 AP4M1O00189 453 aa5.92□□□□□ -1.46
SPG11-205ENST00000558080 TXNL1O43396 289 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms