RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 WSB1Q9Y6I7 421 aa3.18□□□□□ -1.9
MTHFD1-216ENST00000557539 NEBP20929 6669 aa3.18□□□□□ -1.9
MTHFD1-216ENST00000557539 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 LOC102724200A0A096LPH7 203 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 TRAV8-2A0A0B4J237 113 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 IGHV7-4-1A0A0J9YVY3 117 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 CXorf51AA0A1B0GTR3 108 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 TMEM223A0PJW6 202 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 F5H5K5 113 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 UPK1AO00322 258 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 PLIN3O60664 434 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 OR2A4O95047 310 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 HLA-DQA1P01909 254 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 SLC2A1P11166 492 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 GABRA1P14867 456 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 HIST1H1CP16403 213 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ATF1P18846 271 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ME2P23368 584 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 CAPZBP47756 277 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ZNF404Q494X3 552 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 SLC36A2Q495M3 483 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 Q499Y3 187 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 TSPO2Q5TGU0 170 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 DCXRQ7Z4W1 244 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 GALNT10Q86SR1 603 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 MKXQ8IYA7 352 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ENTHD1Q8IYW4 607 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 TEX29Q8N6K0 151 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 OR6K3Q8NGY3 331 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ORAOV1Q8WV07 137 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 CPNE4Q96A23 557 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 NARS2Q96I59 477 aaKnown RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 RBP7Q96R05 134 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 OR2A7Q96R45 310 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ZNF649Q9BS31 505 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 PARP11Q9NR21 331 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 CA10Q9NS85 328 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 RBM12B-AS1Q9P1G2 102 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 TP53TG3Q9ULZ0 132 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 POLR3HQ9Y535 204 aaPredicted RBP3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 TMEM14AQ9Y6G1 99 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 ARHGAP21Q5T5U3 1957 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 VPS13BQ7Z7G8 4022 aa3.17□□□□□ -1.9
MTHFD1-216ENST00000557539 DOCK4Q8N1I0 1966 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 PINLYPA6NC86 204 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 CENPBD1B2RD01 187 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 E7EQ34 232 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 F5H768 121 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 CRYBA1P05813 215 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 UGT2B7P16662 529 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 OPRM1P35372 400 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 MNAT1P51948 309 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 MRPS15P82914 257 aaKnown RBP3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 MEF2CQ06413 473 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 TBC1D28Q2M2D7 210 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 TEX30Q5JUR7 227 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 FBXL22Q6P050 247 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 FAM231DQ6ZW35 169 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 ZNF550Q7Z398 422 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 CYB561D1Q8N8Q1 229 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 SLC25A29Q8N8R3 303 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 GATD1Q8NB37 220 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 OR5T1Q8NG75 326 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 ZNF420Q8TAQ5 688 aaPredicted RBP3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 SYNPRQ8TBG9 265 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 CIRBP-AS1Q8TBR5 109 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 LINC01587Q99440 93 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 NDFIP1Q9BT67 221 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 ASB8Q9H765 288 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 ZNF355PQ9NSJ1 428 aa3.16□□□□□ -1.9
MTHFD1-216ENST00000557539 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.9
MTHFD1-216ENST00000557539 ARFGEF3Q5TH69 2177 aa3.15□□□□□ -1.9
MTHFD1-216ENST00000557539 IGHV3-49A0A0A0MS15 119 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 DAPL1A0PJW8 107 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 TMEM72A0PK05 275 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 PGPA6NDG6 321 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 CEACAM18A8MTB9 384 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 CCRL2O00421 344 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 PHYHO14832 338 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 FFAR1O14842 300 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 BIRC5O15392 142 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 PDCD6O75340 191 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 SCO1O75880 301 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 LY6HO94772 140 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 UCHL3P15374 230 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 AKR1C4P17516 323 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 RCVRNP35243 200 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 CTAG1AP78358 180 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 MYL5Q02045 173 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 SLC9A3R2Q15599 337 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 PDZD11Q5EBL8 140 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 UBE2NLQ5JXB2 153 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 ZFP1Q6P2D0 407 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 CASP12Q6UXS9 341 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 WDR86Q86TI4 376 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 PDPNQ86YL7 162 aa3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 RIBC1Q8N443 379 aaPredicted RBP3.15□□□□□ -1.91
MTHFD1-216ENST00000557539 OR5M1Q8NGP8 315 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms