RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 NSUN5P1Q3KNT7 163 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 NCR3LG1Q68D85 454 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 ZNF818PQ6ZRF7 136 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 KLHDC1Q8N7A1 406 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 BVESQ8NE79 360 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 OR10V1Q8NGI7 309 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 OR5D13Q8NGL4 314 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 OR1S1Q8NH92 325 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 C17orf50Q8WW18 174 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 AKR1E2Q96JD6 320 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 TP53RKQ96S44 253 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 TOLLIPQ9H0E2 274 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 CCL28Q9NRJ3 127 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 MED9Q9NWA0 146 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 KCNIP1Q9NZI2 227 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 OR5AC2Q9NZP5 309 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 GSKIPQ9P0R6 139 aa10.05□□□□□ -0.8
SHMT2-230ENST00000557427 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-230ENST00000557427 LEUTXA8MZ59 168 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 H0Y980 276 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 DEDDO75618 318 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 CDS2O95674 445 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 RLN2P04090 185 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 FBP1P09467 338 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 COX7A1P24310 79 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 PAX6P26367 422 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 SAA4P35542 130 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 OR3A1P47881 315 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 LUMP51884 338 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-230ENST00000557427 EDDM3AQ14507 147 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 ZNF273Q14593 569 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 SMCO1Q147U7 214 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 C6orf183Q5T699 404 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 HCP5Q6MZN7 132 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 TRAT1Q6PIZ9 186 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 LYZL2Q7Z4W2 148 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 C11orf42Q8N5U0 333 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 TPRX1Q8N7U7 411 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 STOML3Q8TAV4 291 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 RRNAD1Q96FB5 475 aaKnown RBP10.04□□□□□ -0.8
SHMT2-230ENST00000557427 SNX22Q96L94 193 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 SPIN2AQ99865 258 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 SPIN2BQ9BPZ2 258 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 FAM234AQ9H0X4 552 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
SHMT2-230ENST00000557427 hCG_1809904A0A1W2PP81 198 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 A0A1W2PPE2 198 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 A0A1W2PR64 198 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 A0A1W2PRV1 198 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 HSD17B6O14756 317 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 ZNF737O75373 536 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-230ENST00000557427 SPDEFO95238 335 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 NMBP08949 121 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 RRASP10301 218 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 S100A10P60903 97 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 TMEM268Q5VZI3 342 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 ALKAL2Q6UX46 152 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
SHMT2-230ENST00000557427 SLC35G3Q8N808 338 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 IL1F10Q8WWZ1 152 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 R3HDM4Q96D70 268 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 COQ2Q96H96 371 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 ABHD14BQ96IU4 210 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 ZNF471Q9BX82 626 aaPredicted RBP10.03□□□□□ -0.8
SHMT2-230ENST00000557427 SLC25A32Q9H2D1 315 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 PLEKHA2Q9HB19 425 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 OR1A1Q9P1Q5 309 aa10.03□□□□□ -0.8
SHMT2-230ENST00000557427 DNAH7Q8WXX0 4024 aa10.02□□□□□ -0.8
SHMT2-230ENST00000557427 BTBD17A6NE02 478 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 E5RGE8 158 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 K7EPK0 472 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 TAAR5O14804 337 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 HSPA12AO43301 675 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 F2RP25116 425 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 LGALS4P56470 323 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 MSMO1Q15800 293 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 CASC10Q5T4H9 136 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 ZNF695Q8IW36 515 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 ZBTB34Q8NCN2 500 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 OR4D5Q8NGN0 318 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 CYTL1Q9NRR1 136 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 NSG2Q9Y328 171 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.81
SHMT2-230ENST00000557427 KIAA2026Q5HYC2 2103 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 TRAV39A0A0B4J263 110 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 C12orf77C9JDV5 145 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 MBPP02686 304 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-230ENST00000557427 CD28P10747 220 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 TPT1P13693 172 aaKnown RBP10.01□□□□□ -0.81
SHMT2-230ENST00000557427 VDAC1P21796 283 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 DLX6P56179 175 aa10.01□□□□□ -0.81
SHMT2-230ENST00000557427 EIF5AP63241 154 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms