RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CMTM1Q8IZ96 169 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 SPAG16Q8N0X2 631 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 TMEM229BQ8NBD8 167 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 LFNGQ8NES3 379 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 OR5M8Q8NGP6 311 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 VSTM2AQ8TAG5 236 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 CD300LFQ8TDQ1 290 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 ARPC1AQ92747 370 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 TMEM68Q96MH6 324 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 GPHA2Q96T91 129 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 FBXO7Q9Y3I1 522 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 A0A1W2PN81 502 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 FABP12A6NFH5 140 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 NUDT19A8MXV4 375 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 GPR31O00270 319 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 RBFOX2O43251 390 aaKnown RBP eCLIP8.35□□□□□ -1.07
LINC00239-201ENST00000556973 OR2A4O95047 310 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 HPRT1P00492 218 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 PF4P02776 101 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 CD3DP04234 171 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 SAA1P0DJI8 122 aaPredicted RBP8.35□□□□□ -1.07
LINC00239-201ENST00000556973 CHRNA7P36544 502 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 RAB9AP51151 201 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 TAS2R19P59542 299 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 GNB1P62873 340 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 DGCR2P98153 550 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 NDPQ00604 133 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 PRSS8Q16651 343 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 ECSCRQ19T08 205 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 MRGPRG-AS1Q2M3A8 158 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 RNASE12Q5GAN4 147 aaKnown RBP8.35□□□□□ -1.07
LINC00239-201ENST00000556973 RNASE10Q5GAN6 216 aaKnown RBP8.35□□□□□ -1.07
LINC00239-201ENST00000556973 IDO2Q6ZQW0 420 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 MMD2Q8IY49 270 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 ARRDC1Q8N5I2 433 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 POC5Q8NA72 575 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 KLHL30-AS1Q8NEE0 82 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 WFDC9Q8NEX5 89 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 UBE2E2Q96LR5 201 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 OR2A7Q96R45 310 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 FAM103A1Q9BTL3 118 aaKnown RBP8.35□□□□□ -1.07
LINC00239-201ENST00000556973 NDUFA13Q9P0J0 144 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 FOXA2Q9Y261 457 aaPredicted RBP8.35□□□□□ -1.07
LINC00239-201ENST00000556973 A3GALT2U3KPV4 340 aa8.35□□□□□ -1.07
LINC00239-201ENST00000556973 M0QYG6 137 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 GSTZ1O43708 216 aaPredicted RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 RAMP3O60896 148 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 ACTL6BO94805 426 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 CD74P04233 296 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 S100GP29377 79 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 S100A5P33763 92 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 MYCNOSP40205 109 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 TAS2R31P59538 309 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 SSBP2P81877 361 aaPredicted RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 KIAA0141Q14154 515 aaPredicted RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 TNXAQ16473 311 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 AADACL3Q5VUY0 350 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 STEAP1BQ6NZ63 245 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 LCNL1Q6ZST4 164 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 C18orf65Q6ZTR6 163 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 C8orf86Q6ZUL3 223 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 SLC38A6Q8IZM9 456 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 PUSL1Q8N0Z8 303 aaKnown RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 ZNF491Q8N8L2 437 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 OR51H1Q8NH63 302 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 GRPEL2Q8TAA5 225 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 TMEM167AQ8TBQ9 72 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 MYOZ3Q8TDC0 251 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 SMIM4Q8WVI0 70 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 DGCR14Q96DF8 476 aaKnown RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 RHOVQ96L33 236 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 SOSTQ9BQB4 213 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 RSRP1Q9BUV0 290 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 TINAGL1Q9GZM7 467 aaPredicted RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 FXYD6Q9H0Q3 95 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 KLK15Q9H2R5 256 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 ZNF430Q9H8G1 570 aaPredicted RBP8.34□□□□□ -1.07
LINC00239-201ENST00000556973 PLEKHA2Q9HB19 425 aa8.34□□□□□ -1.07
LINC00239-201ENST00000556973 MSGN1A6NI15 193 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 SOX15O60248 233 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 KBTBD11O94819 623 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 RAB3DO95716 219 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 NQO2P16083 231 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 CD33P20138 364 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 F2RP25116 425 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 MAS1LP35410 378 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 MEF2DQ14814 521 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 LHFPL1Q86WI0 220 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 VKORC1L1Q8N0U8 176 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 OR4A5Q8NH83 315 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 TERB2Q8NHR7 220 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 C4orf3Q8WVX3 66 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 ZNF486Q96H40 463 aaPredicted RBP8.33□□□□□ -1.08
LINC00239-201ENST00000556973 PHB2Q99623 299 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 SLA2Q9H6Q3 261 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 VSIG4Q9Y279 399 aa8.33□□□□□ -1.08
LINC00239-201ENST00000556973 FBN3Q75N90 2809 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
LINC00239-201ENST00000556973 H3BUA1 57 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms