RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 ACTL6BO94805 426 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 OR2C1O95371 312 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
CHD8-211ENST00000556833 ARFRP1Q13795 201 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 C15orf32Q32M92 178 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 RNLSQ5VYX0 342 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 LINC00322Q6ZN03 302 aaPredicted RBP11.14□□□□□ -0.63
CHD8-211ENST00000556833 TEX45Q8NA69 505 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 DDB2Q92466 427 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 ZC4H2Q9NQZ6 224 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 SIGLEC8Q9NYZ4 499 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 RAB22AQ9UL26 194 aa11.14□□□□□ -0.63
CHD8-211ENST00000556833 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
CHD8-211ENST00000556833 C2orf70A6NJV1 201 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 FAM223BA6NKX1 122 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 ANKRD65E5RJM6 399 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 RAB27BO00194 218 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 RRASP10301 218 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 FOLR2P14207 255 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 PMS2P11Q13670 270 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 DEFB114Q30KQ6 69 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 FAM223AQ8IWN6 122 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 H1FOOQ8IZA3 346 aaPredicted RBP11.13□□□□□ -0.63
CHD8-211ENST00000556833 OR10R2Q8NGX6 335 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 FYTTD1Q96QD9 318 aaKnown RBP11.13□□□□□ -0.63
CHD8-211ENST00000556833 GPHA2Q96T91 129 aa11.13□□□□□ -0.63
CHD8-211ENST00000556833 MFNGO00587 321 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 AIREO43918 545 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
CHD8-211ENST00000556833 MYOD1P15172 320 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 HIST1H1DP16402 221 aaKnown RBP11.12□□□□□ -0.63
CHD8-211ENST00000556833 NFYAP23511 347 aaPredicted RBP11.12□□□□□ -0.63
CHD8-211ENST00000556833 GADD45AP24522 165 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 TALDO1P37837 337 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 AQP4P55087 323 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 RPL30P62888 115 aaKnown RBP11.12□□□□□ -0.63
CHD8-211ENST00000556833 TPBGQ13641 420 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 KCTD9Q7L273 389 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 OR2K2Q8NGT1 345 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 ADTRPQ96IZ2 230 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 VCXQ9H320 206 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
CHD8-211ENST00000556833 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 ZNF320A2RRD8 509 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 DPPA5A6NC42 116 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 CASQ2O14958 399 aaPredicted RBP11.11□□□□□ -0.63
CHD8-211ENST00000556833 RGS10O43665 173 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 REG1AP05451 166 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 CDK10Q15131 360 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 CLEC19AQ6UXS0 136 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 SSX9Q7RTT3 188 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 ST6GALNAC5Q9BVH7 336 aa11.11□□□□□ -0.63
CHD8-211ENST00000556833 TEX22C9J3V5 150 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 E7EUB6 86 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 NDUFB8O95169 186 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 AREGP15514 252 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 ARL3P36405 182 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 MLLT11Q13015 90 aaPredicted RBP11.1□□□□□ -0.63
CHD8-211ENST00000556833 TRAM1Q15629 374 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 MMD2Q8IY49 270 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 TTC9CQ8N5M4 171 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
CHD8-211ENST00000556833 CCDC140Q96MF4 163 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 MGLLQ99685 303 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 ATG5Q9H1Y0 275 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 NKX1-2Q9UD57 310 aaPredicted RBP11.1□□□□□ -0.63
CHD8-211ENST00000556833 SPATA2Q9UM82 520 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 TPRKBQ9Y3C4 175 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 DMRT1Q9Y5R6 373 aa11.1□□□□□ -0.63
CHD8-211ENST00000556833 IGKV1D-13A0A0B4J2D9 117 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 IGHV3-35A0A0C4DH35 117 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 A0A1B0GW64 132 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
CHD8-211ENST00000556833 LY6G6CO95867 125 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
CHD8-211ENST00000556833 IGKV1-13P0DP09 117 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 CRHBPP24387 322 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
CHD8-211ENST00000556833 BTNL8Q6UX41 500 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 ZNF645Q8N7E2 425 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 OR52B4Q8NGK2 314 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 NUDCD2Q8WVJ2 157 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 TCTEX1D2Q8WW35 142 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
CHD8-211ENST00000556833 MLXQ9UH92 298 aa11.09□□□□□ -0.63
CHD8-211ENST00000556833 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
CHD8-211ENST00000556833 IFITM5A6NNB3 132 aa11.08□□□□□ -0.64
CHD8-211ENST00000556833 CREBL2O60519 120 aaPredicted RBP11.08□□□□□ -0.64
CHD8-211ENST00000556833 MYL9P24844 172 aa11.08□□□□□ -0.64
CHD8-211ENST00000556833 PSMA1P25786 263 aaKnown RBP11.08□□□□□ -0.64
CHD8-211ENST00000556833 SSX1Q16384 188 aa11.08□□□□□ -0.64
CHD8-211ENST00000556833 ZNF57Q68EA5 555 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms