RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 RPL26L1Q9UNX3 145 aaKnown RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 POLR1DQ9Y2S0 133 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 RBM7Q9Y580 266 aaKnown RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 ABCC11Q96J66 1382 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 GRIN2BQ13224 1484 aa0.91□□□□□ -2.26
SCFD1-218ENST00000556256 EIF4G1Q04637 1599 aaKnown RBP0.91□□□□□ -2.26
SCFD1-218ENST00000556256 CHD5Q8TDI0 1954 aa0.9□□□□□ -2.26
SCFD1-218ENST00000556256 RGS12O14924 1447 aa0.9□□□□□ -2.26
SCFD1-218ENST00000556256 KMT2BQ9UMN6 2715 aaPredicted RBP0.9□□□□□ -2.26
SCFD1-218ENST00000556256 DISP1Q96F81 1524 aa0.9□□□□□ -2.26
SCFD1-218ENST00000556256 DICER1Q9UPY3 1922 aaKnown RBP0.9□□□□□ -2.27
SCFD1-218ENST00000556256 A0A1B0GVG6 124 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 SSNA1O43805 119 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 C1QCP02747 245 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 ALDH3A1P30838 453 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 RAP1GDS1P52306 607 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 FXYD7P58549 80 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 TNFAIP6P98066 277 aaPredicted RBP0.9□□□□□ -2.27
SCFD1-218ENST00000556256 LRRC75BQ2VPJ9 315 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 FAM201AQ5SY85 155 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 FAM78BQ5VT40 261 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 OR1L8Q8NGR8 309 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 OR13C8Q8NGS7 320 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 OR2T27Q8NH04 317 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 RAB2BQ8WUD1 216 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 ASB17Q8WXJ9 295 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 VCX3BQ9H321 246 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 ZNHIT6Q9NWK9 470 aaKnown RBP0.9□□□□□ -2.27
SCFD1-218ENST00000556256 BABAM2Q9NXR7 383 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 TAAR3PQ9P1P4 343 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 ANAPC10Q9UM13 185 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 C15orf41Q9Y2V0 281 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 COQ4Q9Y3A0 265 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 MDC1Q14676 2089 aaKnown RBP0.9□□□□□ -2.27
SCFD1-218ENST00000556256 TENM3Q9P273 2699 aa0.9□□□□□ -2.27
SCFD1-218ENST00000556256 DOCK10Q96BY6 2186 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 NYNRINQ9P2P1 1898 aaKnown RBP0.89□□□□□ -2.27
SCFD1-218ENST00000556256 RFPL4AA6NLU0 287 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 SIGLEC16A6NMB1 481 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 A8MUN3 132 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 RFPL4AL1F8VTS6 287 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 CXCR6O00574 342 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 COX7A2LO14548 114 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 PFDN6O15212 129 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 RPL12P30050 165 aaKnown RBP0.89□□□□□ -2.27
SCFD1-218ENST00000556256 CCR2P41597 374 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 TAS2R20P59543 309 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 ERHP84090 104 aaKnown RBP0.89□□□□□ -2.27
SCFD1-218ENST00000556256 TNFAIP8L3Q5GJ75 292 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 LYZL1Q6UWQ5 148 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 LRRN1Q6UXK5 716 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 RASSF6Q6ZTQ3 369 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 UMODL1-AS1Q8N2C9 162 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 OR51T1Q8NGJ9 327 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 ZNF563Q8TA94 476 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 C12orf43Q96C57 262 aaKnown RBP0.89□□□□□ -2.27
SCFD1-218ENST00000556256 NCKAP5O14513 1909 aa0.89□□□□□ -2.27
SCFD1-218ENST00000556256 SCN9AQ15858 1988 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 MAP3K5Q99683 1374 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 A0A0J9YW62 118 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 C21orf140B9A014 251 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 DISC1C4P0D8 188 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 M0QZ92 97 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 LST1O00453 97 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 TXNDC9O14530 226 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 DEXIO95424 95 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 NAPSAO96009 420 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 TPM3P06753 285 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 GPX1P07203 203 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 OCM2P0CE71 109 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 ZNF705DP0CH99 300 aaPredicted RBP0.88□□□□□ -2.27
SCFD1-218ENST00000556256 ZNF705BP0CI00 300 aaPredicted RBP0.88□□□□□ -2.27
SCFD1-218ENST00000556256 CA5AP35218 305 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 MAGEA2P43356 314 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 REG1BP48304 166 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 BLVRAP53004 296 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 GLO1Q04760 184 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 ACSM3Q53FZ2 586 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 ZNF550Q7Z398 422 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 COA5Q86WW8 74 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 LRRC28Q86X40 367 aaPredicted RBP0.88□□□□□ -2.27
SCFD1-218ENST00000556256 DYNAPQ8N1N2 210 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 SLC22A24Q8N4F4 322 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 PIGXQ8TBF5 258 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 IMMP2LQ96T52 175 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 OR51I2Q9H344 312 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 C3orf18Q9UK00 162 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 PRELID1Q9Y255 219 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 NUP160Q12769 1436 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 COL4A1P02462 1669 aa0.88□□□□□ -2.27
SCFD1-218ENST00000556256 WDR90Q96KV7 1748 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 TRAV7A0A075B6U4 112 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 IGHV1-18A0A0C4DH31 117 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 OR4C45A6NMZ5 311 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 H0Y980 276 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 SLC16A4O15374 487 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 PLA2G10O15496 165 aa0.87□□□□□ -2.27
SCFD1-218ENST00000556256 PGLYRP1O75594 196 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-218ENST00000556256 LGALS1P09382 135 aaKnown RBP0.87□□□□□ -2.27
SCFD1-218ENST00000556256 SLCO1A2P46721 670 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms