RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 HRASP01112 189 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 ZNF137PP52743 207 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 CLINT1Q14677 625 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 PDLIM3Q53GG5 364 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-205ENST00000556096 WDR25Q64LD2 544 aaPredicted RBP12.01□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM186Q96B77 213 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 ATP5SQ99766 215 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 UBTD1Q9HAC8 227 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 ZNF705EA8MWA4 302 aaPredicted RBP12□□□□□ -0.49
VPS33B-205ENST00000556096 A8MXK9 166 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 F12P00748 615 aaPredicted RBP12□□□□□ -0.49
VPS33B-205ENST00000556096 BLOC1S1P78537 153 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 RELBQ01201 579 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TLE4Q04727 773 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 RTL8BQ17RB0 113 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM14EPQ6UXP3 125 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 ABHD12Q8N2K0 398 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM217Q8N7C4 229 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 LY6G5BQ8NDX9 201 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 OR4A16Q8NH70 328 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 DTD1Q8TEA8 209 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TNFRSF14Q92956 283 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM133Q9H2Q1 129 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 PATZ1Q9HBE1 687 aaKnown RBP12□□□□□ -0.49
VPS33B-205ENST00000556096 SLC35D1Q9NTN3 355 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM140Q9NV12 185 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 ZNRD1Q9P1U0 126 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 PPIAL4CA0A0B4J2A2 164 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 NUDT19A8MXV4 375 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 I3L521 148 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 RBMXL2O75526 392 aaKnown RBP12□□□□□ -0.49
VPS33B-205ENST00000556096 PPIAL4GP0DN37 164 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 RAB5CP51148 216 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 SPCS3P61009 180 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 HBG1P69891 147 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 HBG2P69892 147 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM267Q0VDI3 215 aaPredicted RBP12□□□□□ -0.49
VPS33B-205ENST00000556096 TOR2AQ5JU69 321 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 SPANXN5Q5MJ07 72 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 ZNF429Q86V71 674 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 OR10X1Q8NGY0 326 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 ST6GALNAC6Q969X2 333 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 RHOVQ96L33 236 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 AIFM2Q9BRQ8 373 aa12□□□□□ -0.49
VPS33B-205ENST00000556096 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
VPS33B-205ENST00000556096 IL6RP08887 468 aaPredicted RBP11.99□□□□□ -0.49
VPS33B-205ENST00000556096 METTL15P1P0C7V9 234 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 KRTAP10-9P60411 292 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 HSD17B11Q8NBQ5 300 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 OR5AN1Q8NGI8 311 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 NRGNQ92686 78 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 MARC2Q969Z3 335 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 GNPNAT1Q96EK6 184 aaPredicted RBP11.99□□□□□ -0.49
VPS33B-205ENST00000556096 PARP11Q9NR21 331 aa11.99□□□□□ -0.49
VPS33B-205ENST00000556096 FBN2P35556 2912 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 RAB19A4D1S5 217 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 CEBPZOSA8MTT3 80 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 SCAF4O95104 1147 aaKnown RBP11.98□□□□□ -0.49
VPS33B-205ENST00000556096 APOA2P02652 100 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 ATP6V0CP27449 155 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 CDKN1AP38936 164 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 EFNA4P52798 201 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 HAPLN4Q86UW8 402 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 OR13D1Q8NGV5 346 aa11.98□□□□□ -0.49
VPS33B-205ENST00000556096 TSNAXQ99598 290 aaKnown RBP11.98□□□□□ -0.49
VPS33B-205ENST00000556096 MRPL20Q9BYC9 149 aaKnown RBP11.98□□□□□ -0.49
VPS33B-205ENST00000556096 STRAPQ9Y3F4 350 aaKnown RBP11.98□□□□□ -0.49
VPS33B-205ENST00000556096 hCG_1809904A0A1W2PP81 198 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 A0A1W2PPE2 198 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 A0A1W2PR64 198 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 A0A1W2PRV1 198 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 IFNA5P01569 189 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 IFNA17P01571 189 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 LIPFP07098 398 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 IL3RAP26951 378 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 PRRX1P54821 245 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 GNB2P62879 340 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 ARL16Q0P5N6 197 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 OR4A47Q6IF82 309 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 OSR1Q8TAX0 266 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-205ENST00000556096 ZDHHC16Q969W1 377 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 PCGF1Q9BSM1 259 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 PARD6GQ9BYG4 376 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-205ENST00000556096 SH3BGRL3Q9H299 93 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 MMP26Q9NRE1 261 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 FOXA2Q9Y261 457 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-205ENST00000556096 C15orf61A6NNL5 157 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 H0YJW9 148 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 OVOL3O00110 214 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 GPR6P46095 362 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-205ENST00000556096 OR2B8PP59922 312 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 ATP6V1FQ16864 119 aa11.97□□□□□ -0.49
VPS33B-205ENST00000556096 TMEM177Q53S58 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms