RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 OR4S2Q8NH73 311 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 NEU4Q8WWR8 484 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-235ENST00000556082 R3HDM4Q96D70 268 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 AIFM2Q9BRQ8 373 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 RAB1BQ9H0U4 201 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 RBKSQ9H477 322 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 DYSFO75923 2080 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 PCNX1Q96RV3 2341 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 NCOR2Q9Y618 2525 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 LAMA5O15230 3695 aa6.79□□□□□ -1.32
ATXN3-235ENST00000556082 ATMQ13315 3056 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 DSCAMO60469 2012 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 SAA2-SAA4A0A096LPE2 208 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 MEX3AA1L020 520 aaKnown RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 PPIHO43447 177 aaKnown RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 FCGR3BO75015 233 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 MMP23AO75900 390 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 CST7O76096 145 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 IFNA5P01569 189 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 IGHV2-70P01814 119 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 RBP4P02753 201 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 IL6RP08887 468 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 SAA2P0DJI9 122 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 COL8A2P25067 703 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 NFYBP25208 207 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF137PP52743 207 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 SPCS3P61009 180 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 ERVK-16P61578 105 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 GNB2P62879 340 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF273Q14593 569 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 OR2B11Q5JQS5 317 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 UTF1Q5T230 341 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 PRAMEF5Q5TYX0 476 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 C11orf71Q6IPW1 123 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 CENPVQ7Z7K6 275 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 LYG1Q8N1E2 194 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 ZNF383Q8NA42 475 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 ITLN2Q8WWU7 325 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 TNFRSF14Q92956 283 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 PSMG3Q9BT73 122 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 CTSZQ9UBR2 303 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 RALYQ9UKM9 306 aaKnown RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 NUP50Q9UKX7 468 aa6.78□□□□□ -1.32
ATXN3-235ENST00000556082 SPENQ96T58 3664 aaKnown RBP6.78□□□□□ -1.32
ATXN3-235ENST00000556082 ARID1AO14497 2285 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 A0A1B0GW64 132 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 A0A1W2PPH5 198 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 MED19A0JLT2 244 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM218A2RU14 115 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 HRASP01112 189 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 CT45A6P0DMU7 189 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 CT45A5P0DMU8 189 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 CT45A7P0DMV0 189 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 ATP6V0CP27449 155 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 ATP5IP56385 69 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-235ENST00000556082 LINC00205P59089 165 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 RPP30P78346 268 aaKnown RBP6.77□□□□□ -1.33
ATXN3-235ENST00000556082 CLINT1Q14677 625 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 RTL8BQ17RB0 113 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 VWC2Q2TAL6 325 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 LRRC75BQ2VPJ9 315 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 C10orf91Q5T1B1 145 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 SP5Q6BEB4 398 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-235ENST00000556082 ZNF841Q6ZN19 808 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 HAPLN4Q86UW8 402 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 C11orf42Q8N5U0 333 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 ZNF525Q8N782 197 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM217Q8N7C4 229 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 HSD17B11Q8NBQ5 300 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 BPIFCQ8NFQ6 507 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 OR5AN1Q8NGI8 311 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 OR2G3Q8NGZ4 309 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 C8orf46Q8TAG6 207 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 DTD1Q8TEA8 209 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 TMEM186Q96B77 213 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 PINX1Q96BK5 328 aaKnown RBP6.77□□□□□ -1.33
ATXN3-235ENST00000556082 EAF1Q96JC9 268 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-235ENST00000556082 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 MIOXQ9UGB7 285 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 TIMM9Q9Y5J7 89 aa6.77□□□□□ -1.33
ATXN3-235ENST00000556082 ICE1Q9Y2F5 2266 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 TRAV1-1A0A0B4J248 108 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 BTBD17A6NE02 478 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 PMS2P5A8MQ11 134 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 J3QR06 171 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 NXPH3O95157 252 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 GOSR1O95249 250 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 CD5P06127 495 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 OR9G9P0C7N8 305 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 METTL15P1P0C7V9 234 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 IAPPP10997 89 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 CCL3L1P16619 93 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 IGFBP2P18065 325 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 M6PRP20645 277 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 VDAC2P45880 294 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-235ENST00000556082 SERF2P84101 59 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 ARL16Q0P5N6 197 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
ATXN3-235ENST00000556082 SPANXN5Q5MJ07 72 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms