RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PPP1CCP36873 323 aaKnown RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 LOXL3P58215 753 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 HOXA4Q00056 320 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 MEF2CQ06413 473 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 GNMTQ14749 295 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 HFEQ30201 348 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 CLLU1Q5K131 121 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 FAM201AQ5SY85 155 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 GPR157Q5UAW9 335 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 SLC7A5P1Q8MH63 180 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 MUC15Q8N387 334 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DRAM1Q8N682 238 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 OR51H1Q8NH63 302 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 OR1S1Q8NH92 325 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 LHFPL5Q8TAF8 219 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 SCARB1Q8WTV0 552 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 CCL17Q92583 94 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 NEUROG1Q92886 237 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 LSM10Q969L4 123 aaKnown RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 RRNAD1Q96FB5 475 aaKnown RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 AQP10Q96PS8 301 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 YPEL2Q96QA6 119 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 HSD17B10Q99714 261 aaKnown RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF471Q9BX82 626 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-204ENST00000555890 OR2D2Q9H210 308 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 PRDM13Q9H4Q3 707 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM106BQ9NUM4 274 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 CALYQ9NYX4 217 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 OR5AC2Q9NZP5 309 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 DUX4Q9UBX2 424 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 RNF150Q9ULK6 438 aa5.61□□□□□ -1.51
SLIRP-204ENST00000555890 IGHV3-43A0A0B4J1X8 118 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 KBTBD11-OT1A0A1B0GTJ5 212 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 A0A1B0GU03 582 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 RNF222A6NCQ9 220 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 DEFB108AA8MXU0 73 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 K7EPK0 472 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 WRBO00258 174 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 ITGB1BP1O14713 200 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 DEDDO75618 318 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 SPDEFO95238 335 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 CFDP00746 253 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 PLAUP00749 431 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 IGLV2-14P01704 120 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 MBPP02686 304 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 PLA2G1BP04054 148 aaKnown RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 IGHV3-43DP0DP04 118 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 TPT1P13693 172 aaKnown RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 MMP9P14780 707 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 NDUFB7P17568 137 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 RPL12P30050 165 aaKnown RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 LPAR6P43657 344 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 NKX2-1P43699 371 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 GPR12P47775 334 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 P2RY1P47900 373 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 PPOXP50336 477 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 RAB7AP51149 207 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 LTC4SQ16873 150 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 MORN2Q502X0 79 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 DGAT2L7PQ6IED9 249 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 ZNF66Q6ZN08 573 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 ZCCHC24Q8N2G6 241 aaKnown RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 FAM71E2Q8N5Q1 922 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 FAM216BQ8N7L0 139 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 OR10A7Q8NGE5 316 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 OR4D5Q8NGN0 318 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 CD300LFQ8TDQ1 290 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 ST8SIA2Q92186 375 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 CORO2AQ92828 525 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 RAB39BQ96DA2 213 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 PHYHIPLQ96FC7 376 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 SPATA25Q9BR10 227 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 TMEM204Q9BSN7 226 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 DCTN5Q9BTE1 182 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 RAB1BQ9H0U4 201 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 GAL3ST2Q9H3Q3 398 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 FAM212BQ9NTI7 297 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 TAS2R3Q9NYW6 316 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 SLC25A10Q9UBX3 287 aaPredicted RBP5.6□□□□□ -1.51
SLIRP-204ENST00000555890 CLN8Q9UBY8 286 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 PSG11Q9UQ72 335 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 LAMP3Q9UQV4 416 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 POMT1Q9Y6A1 747 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 ARFGEF3Q5TH69 2177 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 ABCA13Q86UQ4 5058 aa5.6□□□□□ -1.51
SLIRP-204ENST00000555890 YLPM1P49750 1951 aaKnown RBP5.59□□□□□ -1.51
SLIRP-204ENST00000555890 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 C9orf118A6NHY6 69 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 ADAM20O43506 726 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 GPR137BO60478 399 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 FSTL3O95633 263 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 CGB3P0DN86 165 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 CGB7P0DN87 165 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 HKR1P10072 659 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 COMPP49747 757 aaPredicted RBP5.59□□□□□ -1.51
SLIRP-204ENST00000555890 AKR1C2P52895 323 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 NMSQ5H8A3 153 aa5.59□□□□□ -1.51
SLIRP-204ENST00000555890 EIF5AL1Q6IS14 154 aaKnown RBP5.59□□□□□ -1.51
SLIRP-204ENST00000555890 FAM219AQ8IW50 185 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms