RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 MINDY2Q8NBR6 621 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 LFNGQ8NES3 379 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 OR5M8Q8NGP6 311 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 OR51H1Q8NH63 302 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 DYNC2LI1Q8TCX1 351 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 C4orf3Q8WVX3 66 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 FCAMRQ8WWV6 532 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 DIRAS2Q96HU8 199 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 ZNF355PQ9NSJ1 428 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 RABL2AQ9UBK7 228 aaPredicted RBP9.47□□□□□ -0.89
SRP54-206ENST00000555317 RABL2BQ9UNT1 228 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 VSIG4Q9Y279 399 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 SRRM4A7MD48 611 aaKnown RBP9.46□□□□□ -0.9
SRP54-206ENST00000555317 CTDSP2O14595 271 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 IGLV1-40P01703 118 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 SAA1P0DJI8 122 aaPredicted RBP9.46□□□□□ -0.9
SRP54-206ENST00000555317 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.9
SRP54-206ENST00000555317 MYCNOSP40205 109 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 RAB9AP51151 201 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 MRPS10P82664 201 aaKnown RBP9.46□□□□□ -0.9
SRP54-206ENST00000555317 DEFA6Q01524 100 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 PJVKQ0ZLH3 352 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 IL18Q14116 193 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 PRSS8Q16651 343 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 RNASE10Q5GAN6 216 aaKnown RBP9.46□□□□□ -0.9
SRP54-206ENST00000555317 LPCAT3Q6P1A2 487 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 C18orf65Q6ZTR6 163 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 MMD2Q8IY49 270 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 SPAG16Q8N0X2 631 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 OR52I2Q8NH67 350 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 CD300LFQ8TDQ1 290 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 TMEM68Q96MH6 324 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 GPHA2Q96T91 129 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 GPR61Q9BZJ8 451 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 FBXO7Q9Y3I1 522 aa9.46□□□□□ -0.9
SRP54-206ENST00000555317 CCL24O00175 119 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 GPR31O00270 319 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 OR2A4O95047 310 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 RLN1P04808 185 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 CRYGBP07316 175 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 TBPP20226 339 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 TPPP2P59282 170 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
SRP54-206ENST00000555317 DEFB136Q30KP8 78 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 LYSMD2Q8IV50 215 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 MCFD2Q8NI22 146 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 DPF1Q92782 380 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 RCC1LQ96I51 464 aaKnown RBP9.45□□□□□ -0.9
SRP54-206ENST00000555317 UBE2E2Q96LR5 201 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 OR2A7Q96R45 310 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 FXYD6Q9H0Q3 95 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 MIXL1Q9H2W2 232 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 SLA2Q9H6Q3 261 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 BOLA1Q9Y3E2 137 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 NUBP2Q9Y5Y2 271 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 CEPT1Q9Y6K0 416 aa9.45□□□□□ -0.9
SRP54-206ENST00000555317 G3V4G9 280 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 GABARAPH6UMI1 98 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 M0QYG6 137 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 ARPC1BO15143 372 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 RBFOX2O43251 390 aaKnown RBP eCLIP9.44□□□□□ -0.9
SRP54-206ENST00000555317 KBTBD11O94819 623 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 TRGV3P03979 118 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 PGAM2P15259 253 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 GNRHRP30968 328 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 TAS2R19P59542 299 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 ERVK-16P61578 105 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 SSBP1Q04837 148 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 SSX9Q7RTT3 188 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 MRPL41Q8IXM3 137 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 SLC38A6Q8IZM9 456 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 VKORC1L1Q8N0U8 176 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 LINC00482Q8N8I6 264 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 ZNF491Q8N8L2 437 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 RAX2Q96IS3 184 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 RHOVQ96L33 236 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 MS4A10Q96PG2 267 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 ABHD1Q96SE0 405 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 MCRIP2Q9BUT9 160 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 KLK15Q9H2R5 256 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 ZNF430Q9H8G1 570 aaPredicted RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 HRASLSQ9HDD0 168 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 COA4Q9NYJ1 87 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 KLK11Q9UBX7 282 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 MTFP1Q9UDX5 166 aa9.44□□□□□ -0.9
SRP54-206ENST00000555317 RSL24D1Q9UHA3 163 aaKnown RBP9.44□□□□□ -0.9
SRP54-206ENST00000555317 C13orf42A0A1B0GVH6 325 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 DPPA5A6NC42 116 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 MSGN1A6NI15 193 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 H3BUA1 57 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 RAMP3O60896 148 aa9.43□□□□□ -0.9
SRP54-206ENST00000555317 HPRT1P00492 218 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms