RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 IGKV1-6A0A0C4DH72 117 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 DYNC1I1O14576 645 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 OGG1O15527 345 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 MYOD1P15172 320 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 GABRB1P18505 474 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 GALP22466 123 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 GYS2P54840 703 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 ELLP55199 621 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 ZNF124Q15973 351 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 OR10K2Q6IF99 312 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 NR2C2APQ86WQ0 139 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 EEF1AKMT3Q96AZ1 226 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 C5orf30Q96GV9 206 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 UQCC2Q9BRT2 126 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 OR2D2Q9H210 308 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 RIMS4Q9H426 269 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 UFC1Q9Y3C8 167 aa7.03□□□□□ -1.28
SCFD1-215ENST00000555259 RPL36Q9Y3U8 105 aaKnown RBP7.03□□□□□ -1.28
SCFD1-215ENST00000555259 TRBV5-7A0A0A0MS05 114 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 NPIPB5A8MRT5 1133 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 TEX22C9J3V5 150 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 CREBL2O60519 120 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-215ENST00000555259 CRYZL1O95825 349 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 CLEC3BP05452 202 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 SAA1P0DJI8 122 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-215ENST00000555259 P0DMU3 169 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 FAM231AP0DMU4 169 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 FAM231CP0DMU5 169 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 RRASP10301 218 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 RPS27AP62979 156 aaKnown RBP7.02□□□□□ -1.29
SCFD1-215ENST00000555259 YIF1BQ5BJH7 314 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 OR2G6Q5TZ20 316 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 LAMTOR1Q6IAA8 161 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 Q6ZTC4 211 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 Q8N1X5 172 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 NICN1Q9BSH3 213 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 RNF126Q9BV68 326 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 MGAT4AQ9UM21 535 aa7.02□□□□□ -1.29
SCFD1-215ENST00000555259 TRAV10A0A0B4J240 114 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 IGHV3-35A0A0C4DH35 117 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 LALBAP00709 142 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 GSTT2P0CG29 244 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 GSTT2BP0CG30 244 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 HLA-DMBP28068 263 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 PSMB6P28072 239 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 CDK10Q15131 360 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-215ENST00000555259 MMD2Q8IY49 270 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 NKAIN3Q8N8D7 197 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 Q8NAQ8 132 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 OSR1Q8TAX0 266 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-215ENST00000555259 SLC29A1Q99808 456 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 TM2D1Q9BX74 207 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 TMEM59Q9BXS4 323 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 Q9N2K0 584 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 MRPS18AQ9NVS2 196 aaKnown RBP7.01□□□□□ -1.29
SCFD1-215ENST00000555259 PLEKHJ1Q9NW61 149 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 AK3Q9UIJ7 227 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 AP4S1Q9Y587 144 aa7.01□□□□□ -1.29
SCFD1-215ENST00000555259 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 DPPA5A6NC42 116 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 MFSD2BA6NFX1 497 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 SAC3D1A6NKF1 404 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 C16orf90A8MZG2 172 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 GYG2O15488 501 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 CA1P00915 261 aaPredicted RBP7□□□□□ -1.29
SCFD1-215ENST00000555259 AMBPP02760 352 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 ALPLP05186 524 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 UBBP0CG47 229 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 FCGR1AP12314 374 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 GPR183P32249 361 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 ETV1P50549 477 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 TPBGQ13641 420 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 TMEM187Q14656 261 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 KLK9Q2XQG4 91 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 ZIK1Q3SY52 487 aaPredicted RBP7□□□□□ -1.29
SCFD1-215ENST00000555259 DNAL1Q4LDG9 190 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 TMPRSS11AQ6ZMR5 421 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 Q6ZR54 194 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 PGLYRP3Q96LB9 341 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 Q96MT0 163 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 FYTTD1Q96QD9 318 aaKnown RBP7□□□□□ -1.29
SCFD1-215ENST00000555259 ZNF436Q9C0F3 470 aaPredicted RBP7□□□□□ -1.29
SCFD1-215ENST00000555259 BABAM2Q9NXR7 383 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 KLK9Q9UKQ9 250 aa7□□□□□ -1.29
SCFD1-215ENST00000555259 A0A0A6YYD4 124 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 E7EUB6 86 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 DHFRP00374 187 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 CRYGCP07315 174 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 IL6RP08887 468 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-215ENST00000555259 CD3GP09693 182 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 AREGP15514 252 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 SRMP19623 302 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 SERPINB10P48595 397 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 GNGT1P63211 74 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 UNC119Q13432 240 aa6.99□□□□□ -1.29
SCFD1-215ENST00000555259 SOHLH1Q5JUK2 328 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms