RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ARGFXA6NJG6 315 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 POLR3GO15318 223 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 UGT2B11O75310 529 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 FAM228BP0C875 321 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 LIMS3P0CW19 117 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 LIMS4P0CW20 117 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 PSKH1P11801 424 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 CASQ1P31415 396 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 INPP1P49441 399 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 MP68P56378 58 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 RWDD2BP57060 319 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 AP1S1P61966 158 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 RPS24P62847 133 aaKnown RBP2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 MEF2BQ02080 365 aaPredicted RBP2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 CST6Q15828 149 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 PYCR3Q53H96 274 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 ANGPTL6Q8NI99 470 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 BCL2L14Q9BZR8 327 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 TRABDQ9H4I3 376 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 FBXL12Q9NXK8 326 aa2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 CARHSP1Q9Y2V2 147 aaKnown RBP2.59□□□□□ -1.99
CKS1BP1-201ENST00000555221 TRIOO75962 3097 aa2.59□□□□□ -2
CKS1BP1-201ENST00000555221 CEP250Q9BV73 2442 aa2.59□□□□□ -2
CKS1BP1-201ENST00000555221 TECTAO75443 2155 aa2.59□□□□□ -2
CKS1BP1-201ENST00000555221 KNTC1P50748 2209 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 PLXNA4Q9HCM2 1894 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 A0A1B0GU33 70 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 IQCF5A8MTL0 148 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 EFCAB9A8MZ26 197 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 KPNA3O00505 521 aaPredicted RBP2.58□□□□□ -2
CKS1BP1-201ENST00000555221 ZZEF1O43149 2961 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 EPPINO95925 133 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 CTLA4P16410 223 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 KDELR1P24390 212 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 KDELR2P33947 212 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 RCVRNP35243 200 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 C9orf64Q5T6V5 341 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 KRTCAP2Q8N6L1 136 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 OR4A5Q8NH83 315 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 KCTD4Q8WVF5 259 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 OR5P3Q8WZ94 311 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 B9D2Q9BPU9 175 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 ARL6Q9H0F7 186 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 OR51E2Q9H255 320 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 OR5V1Q9UGF6 321 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 OR51B4Q9Y5P0 310 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 URGCP-MRPS24S4R325 110 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 GBF1Q92538 1859 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 PTPRSQ13332 1948 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 SPTA1P02549 2419 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 MYH10P35580 1976 aa2.58□□□□□ -2
CKS1BP1-201ENST00000555221 OR5K4A6NMS3 321 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 C8orf87E5RJ46 101 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 APOC4-APOC2K7ER74 178 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 CST8O60676 142 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 SH2D1AO60880 128 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 BRI3O95415 125 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 SOX14O95416 240 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 CDS2O95674 445 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 APOC2P02655 101 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 OPN1SWP03999 348 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 CTSEP14091 401 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 CSRP1P21291 193 aaKnown RBP2.57□□□□□ -2
CKS1BP1-201ENST00000555221 EVI2BP34910 448 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 RAB8AP61006 207 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 RAB2AP61019 212 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 PDPK2PQ6A1A2 396 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 C22orf39Q6P5X5 142 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 TMPPEQ6ZT21 453 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 FAM19A3Q7Z5A8 133 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 SELENOHQ8IZQ5 122 aaKnown RBP2.57□□□□□ -2
CKS1BP1-201ENST00000555221 MUC15Q8N387 334 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 Q8NAQ8 132 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 MNS1Q8NEH6 495 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 JOSD2Q8TAC2 188 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 MUC7Q8TAX7 377 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 ZNF514Q96K75 400 aaPredicted RBP2.57□□□□□ -2
CKS1BP1-201ENST00000555221 SNRNP25Q9BV90 132 aaKnown RBP2.57□□□□□ -2
CKS1BP1-201ENST00000555221 TSSK6Q9BXA6 273 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 UGT2B28Q9BY64 529 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 LRRC19Q9H756 370 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 ASCL3Q9NQ33 180 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 KCNIP2Q9NS61 270 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 MS4A12Q9NXJ0 267 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 CD300AQ9UGN4 299 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 RPUSD1Q9UJJ7 312 aaKnown RBP2.57□□□□□ -2
CKS1BP1-201ENST00000555221 GUCA1BQ9UMX6 200 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 HEY1Q9Y5J3 304 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 VWA8A3KMH1 1905 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 PIEZO2Q9H5I5 2752 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 SDK1Q7Z5N4 2213 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 KNL1Q8NG31 2342 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 C2CD3Q4AC94 2353 aa2.57□□□□□ -2
CKS1BP1-201ENST00000555221 PDCD11Q14690 1871 aaKnown RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 ZNF638Q14966 1978 aaKnown RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 FRYQ5TBA9 3013 aa2.56□□□□□ -2
CKS1BP1-201ENST00000555221 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
CKS1BP1-201ENST00000555221 IGHV3OR15-7A0A075B7D8 119 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms