RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 RNASEKQ6P5S7 137 aaKnown RBP7.46□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF841Q6ZN19 808 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 H2BFWTQ7Z2G1 175 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 MOB3BQ86TA1 216 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 PLCE1Q9P212 2302 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 TOX4O94842 621 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
SYNE2-217ENST00000555022 LYG1Q8N1E2 194 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF439Q8NDP4 499 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 OR4P4Q8NGL7 312 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 C22orf15Q8WYQ4 148 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 TECTBQ96PL2 329 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 GP6Q9HCN6 339 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
SYNE2-217ENST00000555022 K7EN84 100 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 MRPL33O75394 65 aaKnown RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 HYPMO75409 117 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 IGLV2-14P01704 120 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 CTSSP25774 331 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 SRP14P37108 136 aaKnown RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 GFRA1P56159 465 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 RIPPLY3P57055 190 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 LEMD1Q68G75 181 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 TUSC5Q8IXB3 177 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 ZNF596Q8TC21 504 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 LINC00479Q96M42 142 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 ALKBH7Q9BT30 221 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 PSMG3Q9BT73 122 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 TCFL5Q9UL49 500 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 TRAV3A0A0B4J244 114 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 TMEM250H0YL14 139 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 FCGR3BO75015 233 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 CER1O95813 267 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 CGAP01215 116 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 CRYBB3P26998 211 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 PDLIM4P50479 330 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 LDLRAD2Q5SZI1 272 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 PQLC2Q6ZP29 291 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 MMD2Q8IY49 270 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 PARD6GQ9BYG4 376 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 WIPI2Q9Y4P8 454 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 PLXNB1O43157 2135 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 C5orf67F2Z3F1 127 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 RAB29O14966 203 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 GOSR1O95249 250 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 OR2H2O95918 312 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 C3orf79P0CE67 100 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 CD27P26842 260 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 DNLZQ5SXM8 178 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 SPINK14Q6IE38 97 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 RPS19BP1Q86WX3 136 aaKnown RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 KIR3DL3Q8N743 410 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 HIPK2Q9H2X6 1198 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 SEPSECSQ9HD40 501 aaKnown RBP7.45□□□□□ -1.22
SYNE2-217ENST00000555022 ARL2-SNX15V9GYD0 113 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 LTBP2Q14767 1821 aa7.45□□□□□ -1.22
SYNE2-217ENST00000555022 DYSFO75923 2080 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 H3BTX0 84 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 RAC2P15153 192 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 SSR4P51571 173 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 FOXA3P55318 350 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-217ENST00000555022 OR8B8Q15620 311 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 C5orf30Q96GV9 206 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 LIN7CQ9NUP9 197 aaKnown RBP7.44□□□□□ -1.22
SYNE2-217ENST00000555022 ZFP30Q9Y2G7 519 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 CFAP47Q6ZTR5 3102 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 A0A1W2PQM1 296 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 PINLYPA6NC86 204 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 ANKRD30BLA7E2S9 258 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 M0QZK8 103 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 SYNGR4O95473 234 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 PLAUP00749 431 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 CELA3BP08861 270 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 COMPP49747 757 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-217ENST00000555022 CCR5P51681 352 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 CPT1CQ8TCG5 803 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 LOXL4Q96JB6 756 aa7.44□□□□□ -1.22
SYNE2-217ENST00000555022 A0A1W2PR77 199 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 OR7C2O60412 319 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 TDGF1P13385 188 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 RBX1P62877 108 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 ACSF3Q4G176 576 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-217ENST00000555022 PRAMEF5Q5TYX0 476 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 PRAMEF6Q5VXH4 476 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 TMEM42Q69YG0 159 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 TEX43Q6ZNM6 134 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 MS4A5Q9H3V2 200 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 CACNA1BQ00975 2339 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 DLL1O00548 723 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 MT-CO3P00414 261 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 WFDC8Q8IUA0 241 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 SLC24A4Q8NFF2 622 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 NINJ1Q92982 152 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 ASCL2Q99929 193 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 STRADBQ9C0K7 418 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 METRNQ9UJH8 293 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 WASHC3Q9Y3C0 194 aa7.43□□□□□ -1.22
SYNE2-217ENST00000555022 LINC00473A8K010 186 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms