RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GABARAPH6UMI1 98 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 PGLYRP1O75594 196 aaPredicted RBP9.64□□□□□ -0.87
SYNE2-214ENST00000554928 OPN1MWP04001 364 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 RLN1P04808 185 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF735P0CB33 412 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 OPN1MW2P0DN77 364 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 OPN1MW3P0DN78 364 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 MYOD1P15172 320 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 PSMB8P28062 276 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 TSPAN5P62079 268 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 FOXE3Q13461 319 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 FXYD3Q14802 87 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 MSMO1Q15800 293 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 PRSS8Q16651 343 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 PHLDA2Q53GA4 152 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 PYHIN1Q6K0P9 492 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 TEX38Q6PEX7 206 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF562Q6V9R5 426 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 SPAG16Q8N0X2 631 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 RNF152Q8N8N0 203 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 LFNGQ8NES3 379 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 OR6F1Q8NGZ6 308 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 OSR1Q8TAX0 266 aaPredicted RBP9.64□□□□□ -0.87
SYNE2-214ENST00000554928 ABHD5Q8WTS1 349 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 SMIM4Q8WVI0 70 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 FCAMRQ8WWV6 532 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 ARPC1AQ92747 370 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 PRELID3BQ9Y3B1 194 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 V9GYH0 126 aa9.64□□□□□ -0.87
SYNE2-214ENST00000554928 A0A1W2PN81 502 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF701M0R085 212 aaPredicted RBP9.63□□□□□ -0.87
SYNE2-214ENST00000554928 CTDSPLO15194 276 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 TPPPO94811 219 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 CD74P04233 296 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 APELAP0DMC3 54 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 RPA2P15927 270 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 PI3P19957 117 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 CHRNA7P36544 502 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 CBX3Q13185 183 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 VMA21Q3ZAQ7 101 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 RNASE10Q5GAN6 216 aaKnown RBP9.63□□□□□ -0.87
SYNE2-214ENST00000554928 UNQ5815/PRO19632Q6UWF5 114 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 SSX9Q7RTT3 188 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 LHFPL1Q86WI0 220 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 C1QL4Q86Z23 238 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 TEX45Q8NA69 505 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 TMEM229BQ8NBD8 167 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 ZBTB34Q8NCN2 500 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 KLHL30-AS1Q8NEE0 82 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 OR4S2Q8NH73 311 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 MYOZ3Q8TDC0 251 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF430Q9H8G1 570 aaPredicted RBP9.63□□□□□ -0.87
SYNE2-214ENST00000554928 GNB4Q9HAV0 340 aa9.63□□□□□ -0.87
SYNE2-214ENST00000554928 TRAV3A0A0B4J244 114 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 A0A1B0GW64 132 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 FABP12A6NFH5 140 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 E7EUB6 86 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 S1PR2O95136 353 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 ELANEP08246 267 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 PF4V1P10720 104 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 PPP5CP53041 499 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 DEFA5Q01523 94 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF79Q15937 498 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF585BQ52M93 769 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 ACTBL2Q562R1 376 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 CXorf66Q5JRM2 361 aaPredicted RBP9.62□□□□□ -0.87
SYNE2-214ENST00000554928 STEAP1BQ6NZ63 245 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 PUSL1Q8N0Z8 303 aaKnown RBP9.62□□□□□ -0.87
SYNE2-214ENST00000554928 COMMD1Q8N668 190 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 OR5B12Q96R08 314 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 RSRP1Q9BUV0 290 aa9.62□□□□□ -0.87
SYNE2-214ENST00000554928 NUDT19A8MXV4 375 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 G3V4G9 280 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 GPR31O00270 319 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 GSTZ1O43708 216 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-214ENST00000554928 RBMXL2O75526 392 aaKnown RBP9.61□□□□□ -0.87
SYNE2-214ENST00000554928 CNIH1O95406 144 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 RAB3DO95716 219 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 TAS2R19P59542 299 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 TNXAQ16473 311 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 C19orf35Q6ZS72 473 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 CCDC190Q86UF4 302 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 ZNF695Q8IW36 515 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 OR5T1Q8NG75 326 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 OR4C16Q8NGL9 310 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 C15orf40Q8WUR7 153 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 RAX2Q96IS3 184 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 RHOVQ96L33 236 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 MS4A10Q96PG2 267 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 GON7Q9BXV9 100 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 ALX4Q9H161 411 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-214ENST00000554928 ZFP57Q9NU63 452 aa9.61□□□□□ -0.87
SYNE2-214ENST00000554928 FOXA2Q9Y261 457 aaPredicted RBP9.61□□□□□ -0.87
SYNE2-214ENST00000554928 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms