RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 PXMP4Q9Y6I8 212 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 SNURFLB1AK76 121 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 NEURL1O76050 574 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 S1PR2O95136 353 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 IGHV3-13P01766 116 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 IGHV3-7P01780 117 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 IGHV2-5P01817 119 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 FOXG1P55316 489 aaPredicted RBP3.3□□□□□ -1.88
KTN1-217ENST00000554831 GFRA1P56159 465 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 SOX8P57073 446 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 BPIFB3P59826 476 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 SELENOTP62341 195 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 RPL31P62899 125 aaKnown RBP3.3□□□□□ -1.88
KTN1-217ENST00000554831 HGFACQ04756 655 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 ZNF146Q15072 292 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 PSG5Q15238 335 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 Q6ZT83 130 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 SLC24A4Q8NFF2 622 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 STXBP6Q8NFX7 210 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 OR51G1Q8NGK1 321 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 CA5BP1Q8WTZ4 195 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 GATAD1Q8WUU5 269 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 BCL2L2Q92843 193 aaPredicted RBP3.3□□□□□ -1.88
KTN1-217ENST00000554831 SIGLEC12Q96PQ1 595 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 RNF2Q99496 336 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 ZFYVE26Q68DK2 2539 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 NUP210Q8TEM1 1887 aaPredicted RBP3.3□□□□□ -1.88
KTN1-217ENST00000554831 EML5Q05BV3 1969 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 SPRY3O43610 288 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 BMP5P22003 454 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 OR10J1P30954 320 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 RND2P52198 227 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 RPL23P62829 140 aaKnown RBP3.3□□□□□ -1.88
KTN1-217ENST00000554831 SPINK9Q5DT21 86 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 TMEM14EPQ6UXP3 125 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 Q6ZSR3 168 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 OR2V2Q96R30 315 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 IMMP2LQ96T52 175 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 WIPI2Q9Y4P8 454 aa3.3□□□□□ -1.88
KTN1-217ENST00000554831 A0A0G2JMM0 328 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 A0A1W2PPB8 328 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 A0A1W2PRS3 328 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 FOXI3A8MTJ6 420 aaPredicted RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 KIR3DP1A8MWS1 328 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 ZNHIT1O43257 154 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CD99P14209 185 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 BRS3P32247 399 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 LHX2P50458 406 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 ZNF83P51522 516 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 PLGLAQ15195 96 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 HES3Q5TGS1 186 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 BTNL3Q6UXE8 466 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 ZNF600Q6ZNG1 722 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 Q6ZRM9 215 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 WDR31Q8NA23 367 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 OR1L8Q8NGR8 309 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 ABHD5Q8WTS1 349 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 H1FXQ92522 213 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 JPT1Q9UK76 154 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 KIAA1671Q9BY89 1806 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 LAMA2P24043 3122 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 AHRRA9YTQ3 701 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 TCAPO15273 167 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 RBFOX2O43251 390 aaKnown RBP eCLIP3.29□□□□□ -1.88
KTN1-217ENST00000554831 CELA3AP09093 270 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 EGR1P18146 543 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 UBE2L3P68036 154 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 ZNF324BQ6AW86 544 aaPredicted RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 TBX15Q96SF7 602 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 QTRT1Q9BXR0 403 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 TIMM8BQ9Y5J9 83 aaPredicted RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 IGKV1-5P01602 117 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CRYABP02511 175 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 CXCL1P09341 107 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 HNF1AP20823 631 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CASP6P55212 293 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CLDN18P56856 261 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 VMA21Q3ZAQ7 101 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 MIC13Q5XKP0 118 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 FAM90A2PQ658T7 463 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 HIST1H2BLQ99880 126 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 NDUFAF3Q9BU61 184 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 NPCDR1Q9BY65 106 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 HES7Q9BYE0 225 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 PARD6AQ9NPB6 346 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 ZNF581Q9P0T4 197 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CHD3Q12873 2000 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 C17orf98A8MV24 154 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 PRR33A8MZF0 331 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 MKRN2OSH3BPM6 223 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 K7EQM0 130 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 ENSAO43768 121 aaKnown RBP3.29□□□□□ -1.88
KTN1-217ENST00000554831 COX7A2P2O60397 106 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 SPINK4O60575 86 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 HLA-DQA1P01909 254 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CT45A10P0DMU9 189 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 CA7P43166 264 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 MFAP2P55001 183 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 B3GALT5-AS1P59052 145 aa3.29□□□□□ -1.88
KTN1-217ENST00000554831 HLA-DRB5Q30154 266 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms