RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 C16orf78Q8WTQ4 265 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM234Q8WY98 164 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 FLYWCH2Q96CP2 140 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 NARS2Q96I59 477 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR7D2Q96RA2 312 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SERPINI1Q99574 410 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SPIN2AQ99865 258 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SPIN2BQ9BPZ2 258 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SLC19A3Q9BZV2 496 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DERL2Q9GZP9 239 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ALX4Q9H161 411 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C16orf95Q9H693 158 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM38AQ9H6F2 299 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 LZTFL1Q9NQ48 299 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 AHSPQ9NZD4 102 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 VPS29Q9UBQ0 182 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MTFP1Q9UDX5 166 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 POFUT2Q9Y2G5 429 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TSSC4Q9Y5U2 329 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 RFNGQ9Y644 331 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DNAH2Q9P225 4427 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 IGLV3-9A0A075B6K5 115 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 IGLV3-32A0A0A0MS00 114 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ARPC4-TTLL3A0A0A6YYG9 625 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 IGKV1D-43A0A0B4J1Z2 117 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 A0A0U1RQV1 116 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 KIR2DS1A0A191URI9 304 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 A6NDN8 102 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C16orf90A8MZG2 172 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 BPY2O14599 106 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PHYHO14832 338 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DEFB4AO15263 64 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF207O43670 478 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SEMA3DO95025 777 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 UBL3O95164 117 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 FARS2O95363 451 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 AHSA1O95433 338 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PSMG1O95456 288 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 IGHV3-7P01780 117 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 HBE1P02100 147 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 APCSP02743 223 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 FGF4P08620 206 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CCL3L1P16619 93 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CTRB1P17538 263 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 GRPRP30550 384 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 RBM34P42696 430 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SYNJ2BPP57105 145 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF121P58317 390 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SLC35A1P78382 337 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PRR3P79522 188 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 H3F3AP84243 136 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DEFA5Q01523 94 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C2orf54Q08AI8 447 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 BIKQ13323 160 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MOBPQ13875 183 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DGCR6Q14129 220 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF266Q14584 549 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 LRRC75BQ2VPJ9 315 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 KRTAP21-2Q3LI59 83 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF404Q494X3 552 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM155Q4W5P6 130 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SPANXN3Q5MJ09 141 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 FAM27D1Q5T7N8 215 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C1orf140Q5VVS0 124 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 STUMQ69YW2 141 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C8orf74Q6P047 294 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZCCHC23Q6ZST2 131 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SSX8Q7RTT4 187 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR2W3Q7Z3T1 314 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 LRRC28Q86X40 367 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CLECL1Q8IZS7 167 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 LGI3Q8N145 548 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TCAIMQ8N3R3 496 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SLC22A24Q8N4F4 322 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM86BQ8N661 226 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CCNYL1Q8N7R7 359 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C11orf72Q8NBR9 251 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 BPIFCQ8NFQ6 507 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR11H1Q8NG94 326 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR11H7Q8NGC8 314 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR51D1Q8NGF3 324 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR51E1Q8TCB6 317 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 RGP1Q92546 391 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MAGOHBQ96A72 148 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PTX4Q96A99 478 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PPCDCQ96CD2 204 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CMBLQ96DG6 245 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TEX37Q96LM6 180 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF75AQ96N20 296 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 C18orf15Q96N68 181 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF317Q96PQ6 595 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CCL13Q99616 98 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 HSD17B10Q99714 261 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DPY30Q9C005 99 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR51I1Q9H343 314 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MED4Q9NPJ6 270 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CLN6Q9NWW5 311 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF391Q9UJN7 358 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PCTPQ9UKL6 214 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TBC1D24Q9ULP9 559 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms