RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR2T4Q8NH00 348 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 SGMS2Q8NHU3 365 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 RNASE11Q8TAA1 199 aaKnown RBP1.31□□□□□ -2.2
SCFD1-213ENST00000554776 PHOSPHO2Q8TCD6 241 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 ASB17Q8WXJ9 295 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 KLK6Q92876 244 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 TXNDC17Q9BRA2 123 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 SPZ1Q9BXG8 430 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 MRPS26Q9BYN8 205 aaKnown RBP1.31□□□□□ -2.2
SCFD1-213ENST00000554776 TTTY12Q9BZ98 90 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 FKBP14Q9NWM8 211 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 TAAR3PQ9P1P4 343 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 PSORS1C2Q9UIG4 136 aa1.31□□□□□ -2.2
SCFD1-213ENST00000554776 CACNA1GO43497 2377 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 REREQ9P2R6 1566 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 MPDZO75970 2070 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 KCNK1O00180 336 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 LST1O00453 97 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 ACOX3O15254 700 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 MYL12AP19105 171 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 PEBP1P30086 187 aaKnown RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 SLCO1A2P46721 670 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 RBM11P57052 281 aaKnown RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 UBE2IP63279 158 aaKnown RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 EMX1Q04741 257 aaPredicted RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 C5orf46Q6UWT4 87 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF550Q7Z398 422 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 MNS1Q8NEH6 495 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 JOSD2Q8TAC2 188 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF675Q8TD23 568 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 DNAJC30Q96LL9 226 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF471Q9BX82 626 aaPredicted RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 OR51I2Q9H344 312 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 KLK5Q9Y337 293 aaPredicted RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 RBM7Q9Y580 266 aaKnown RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 NYNRINQ9P2P1 1898 aaKnown RBP1.3□□□□□ -2.2
SCFD1-213ENST00000554776 ABCC12Q96J65 1359 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 SCN9AQ15858 1988 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 C9orf84Q5VXU9 1444 aa1.3□□□□□ -2.2
SCFD1-213ENST00000554776 COL4A2P08572 1712 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 SIPA1L1O43166 1804 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 DICER1Q9UPY3 1922 aaKnown RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 A0A1B0GVG6 124 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 OR4C45A6NMZ5 311 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 INMT-MINDY4F8WBC2 141 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 H3BRN7 92 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 BHLHE40O14503 412 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 OVOL1O14753 267 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 PLA2G10O15496 165 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 NDUFB2O95178 105 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 AHSA1O95433 338 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 NSA2O95478 260 aaKnown RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 RPS17P08708 135 aaKnown RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 KRTAP12-1P59990 96 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 MAGOHP61326 146 aaKnown RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 RPL30P62888 115 aaKnown RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 DEFB103AP81534 67 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 TNFAIP6P98066 277 aaPredicted RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 HOXC5Q00444 222 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 Q6ZS52 159 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 SLC35E3Q7Z769 313 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 LHFPL1Q86WI0 220 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 ZNF283Q8N7M2 679 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 OR5B17Q8NGF7 314 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 OR8J2Q8NGG1 315 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 LHFPL5Q8TAF8 219 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 SMCR5Q8TEV8 140 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 MRPS24Q96EL2 167 aaKnown RBP1.29□□□□□ -2.2
SCFD1-213ENST00000554776 IMMP2LQ96T52 175 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 GPR84Q9NQS5 396 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 CMTM6Q9NX76 183 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 PRELID1Q9Y255 219 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 MAP3K5Q99683 1374 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 GRIN2BQ13224 1484 aa1.29□□□□□ -2.2
SCFD1-213ENST00000554776 NCKAP5O14513 1909 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 ICE1Q9Y2F5 2266 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TRGV5A0A0B4J1U4 118 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 A8MUN3 132 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 C2orf74A8MZ97 194 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 DISC1C4P0D8 188 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 H3BT86 120 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 I3L521 148 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 J3QQQ9 107 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 NPYP01303 97 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TFPTP0C1Z6 253 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 UCHL3P15374 230 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 CA5AP35218 305 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 MARCKSL1P49006 195 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 RAB13P51153 203 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TAS2R20P59543 309 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 RPL26P61254 145 aaKnown RBP1.28□□□□□ -2.2
SCFD1-213ENST00000554776 FABP9Q0Z7S8 132 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 BATFQ16520 125 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TPRXLQ17RH7 258 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 TNFAIP8L3Q5GJ75 292 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 FAM201AQ5SY85 155 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 HIST2H3PS2Q5TEC6 136 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 LPCAT4Q643R3 524 aa1.28□□□□□ -2.2
SCFD1-213ENST00000554776 ALKAL1Q6UXT8 129 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms