RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ARG1P05089 322 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 IGHV4-38-2P0DP08 117 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 CD99P14209 185 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 PGAM2P15259 253 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 SPNP16150 400 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 GNRHRP30968 328 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 RAB7AP51149 207 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 LUMP51884 338 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-212ENST00000554486 UBE2E1P51965 193 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF137PP52743 207 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 BAMBIQ13145 260 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 EIF4EBP1Q13541 118 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-212ENST00000554486 HLA-DRB5Q30154 266 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 RUSC1-AS1Q66K80 236 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 MZT2BQ6NZ67 158 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 IDO2Q6ZQW0 420 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 NRACQ8N912 160 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 OR2AK2Q8NG84 335 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 OR4P4Q8NGL7 312 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 MARCH1Q8TCQ1 289 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 FAM216AQ8WUB2 273 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 ZFAND2BQ8WV99 257 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 SECTM1Q8WVN6 248 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 C17orf50Q8WW18 174 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 TOMM40LQ969M1 308 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 ST6GALNAC6Q969X2 333 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 CREB3L1Q96BA8 519 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 ABHD14BQ96IU4 210 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF251Q9BRH9 671 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 SLC5A7Q9GZV3 580 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 OR2D2Q9H210 308 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 MMP28Q9H239 520 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 SCP2D1Q9UJQ7 156 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 KCNS2Q9ULS6 477 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 VSIG4Q9Y279 399 aa5.06□□□□□ -1.6
SCFD1-212ENST00000554486 SAA2-SAA4A0A096LPE2 208 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 BUB1B-PAK6H3BSN5 160 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 TOR1AO14656 332 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 HSD17B6O14756 317 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 RAB29O14966 203 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 NPFFO15130 113 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 NDUFB6O95139 128 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 TCRBP04435 133 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 SAA2P0DJI9 122 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-212ENST00000554486 HTR1DP28221 377 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 SAA4P35542 130 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 PRRX1P54821 245 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DEFA1P59665 94 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DEFA3P59666 94 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 KRTAP10-11P60412 298 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DIAPH2-AS1Q14236 149 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 RPL39P5Q59GN2 51 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 TPTE2P1Q5T6R2 138 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 MINOS1Q5TGZ0 78 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF818PQ6ZRF7 136 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 NRARPQ7Z6K4 114 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 LHFPL4Q7Z7J7 247 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 LYG1Q8N1E2 194 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DYNAPQ8N1N2 210 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DRAM1Q8N682 238 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF645Q8N7E2 425 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 ZDHHC22Q8N966 263 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DUSP18Q8NEJ0 188 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 OR10X1Q8NGY0 326 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 SLC25A21Q9BQT8 299 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-212ENST00000554486 RTBDNQ9BSG5 229 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-212ENST00000554486 YAE1D1Q9NRH1 226 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 CCL28Q9NRJ3 127 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 SDHAF2Q9NX18 166 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 DPM3Q9P2X0 92 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 ZNF221Q9UK13 617 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 GPR132Q9UNW8 380 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 FLVCR2Q9UPI3 526 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 GAB2Q9UQC2 676 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 RBM7Q9Y580 266 aaKnown RBP5.05□□□□□ -1.6
SCFD1-212ENST00000554486 SOX21Q9Y651 276 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-212ENST00000554486 MINOS1-NBL1R4GNA1 71 aa5.05□□□□□ -1.6
SCFD1-212ENST00000554486 TEP1Q99973 2627 aaKnown RBP5.05□□□□□ -1.6
SCFD1-212ENST00000554486 ZFHX3Q15911 3703 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 FN1P02751 2386 aaKnown RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 FAM240BA0A1B0GVZ2 78 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 A8MV72 311 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 TEX22C9J3V5 150 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 GPR31O00270 319 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 ARPC1BO15143 372 aaKnown RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 PGLYRP1O75594 196 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 SLC22A5O76082 557 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 NDUFB8O95169 186 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 PTTG1O95997 202 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 CTSDP07339 412 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 PAX6P26367 422 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 IL3RAP26951 378 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 GPR12P47775 334 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 REG1BP48304 166 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 LINC00205P59089 165 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 RND3P61587 244 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 RPL30P62888 115 aaKnown RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 SURF2Q15527 256 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-212ENST00000554486 MSMO1Q15800 293 aa5.04□□□□□ -1.6
SCFD1-212ENST00000554486 PHLDA2Q53GA4 152 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms