RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 GLIPR2Q9H4G4 154 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 PRODH2Q9UF12 536 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 KLF12Q9Y4X4 402 aa2.24□□□□□ -2.05
PRPF39-206ENST00000554429 INTS1Q8N201 2190 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 ANK3Q12955 4377 aaKnown RBP2.24□□□□□ -2.05
PRPF39-206ENST00000554429 SVILO95425 2214 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 MED12LQ86YW9 2145 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 A0A096LNT2 108 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZC3H12DA2A288 527 aaKnown RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 M0R2Z0 102 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TMPRSS11DO60235 418 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 FGF17O60258 216 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 NGFP01138 241 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 IFNA7P01567 189 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 IGHV2-5P01817 119 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 PFN1P07737 140 aaKnown RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 SULT1A3P0DMM9 295 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 SULT1A4P0DMN0 295 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A6P0DMU7 189 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A5P0DMU8 189 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A7P0DMV0 189 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 MYOD1P15172 320 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 GATA1P15976 413 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF708P17019 499 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 NPY1RP25929 384 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 MDH2P40926 338 aaKnown RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 PTH2RP49190 550 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TMBIM6P55061 237 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 B3GALT5-AS1P59052 145 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 HILS1P60008 231 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TIGITQ495A1 244 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 PYDC2Q56P42 97 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A1Q5HYN5 189 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF793Q6ZN11 406 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 SLC35E3Q7Z769 313 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 OAFQ86UD1 273 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 VKORC1L1Q8N0U8 176 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 CT45A3Q8NHU0 189 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 RHOXF1Q8NHV9 184 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 STAG3L4Q8TBR4 150 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF675Q8TD23 568 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 MBD3L1Q8WWY6 194 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 EEF1AKMT3Q96AZ1 226 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 MS4A4EQ96PG1 132 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ATOH8Q96SQ7 321 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 DOHHQ9BU89 302 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ELL3Q9HB65 397 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 MRPL16Q9NX20 251 aaKnown RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 PCTPQ9UKL6 214 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ST3GAL6Q9Y274 331 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 WIPI2Q9Y4P8 454 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 SPIN1Q9Y657 262 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 U3KQE9 123 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ITPR3Q14573 2671 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 DCHS2Q6V1P9 2916 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF407Q9C0G0 2248 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 HRNRQ86YZ3 2850 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF705EA8MWA4 302 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZIC3O60481 467 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 STK16O75716 305 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 CDRT1O95170 752 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 PTHLHP12272 177 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 FOLR2P14207 255 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZBTB25P24278 435 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 AGTR1P30556 359 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TNFSF8P32971 234 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 RPL29P47914 159 aaKnown RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 LHX2P50458 406 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 UBE2E1P51965 193 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 DSCR9P59020 149 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 HERPUD1Q15011 391 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TIMM50Q3ZCQ8 353 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF57Q68EA5 555 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TNFAIP8L2Q6P589 184 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 GGNQ86UU5 652 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 PRR22Q8IZ63 422 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 H1FOOQ8IZA3 346 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF664Q8N3J9 261 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 SPICQ8N5J4 248 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 YIPF7Q8N8F6 280 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 C9orf106Q8NAJ2 232 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 GATD1Q8NB37 220 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 OR10D4PQ8NGN7 298 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF420Q8TAQ5 688 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 BLNKQ8WV28 456 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM170AQ8WVE7 144 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 DDIT4LQ96D03 193 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 STARD4Q96DR4 205 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZC2HC1AQ96GY0 325 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 UBE2E2Q96LR5 201 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF681Q96N22 645 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF300Q96RE9 604 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 WFDC6Q9BQY6 131 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 ANAPC13Q9BS18 74 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 C1QTNF4Q9BXJ3 329 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM59Q9BXS4 323 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 OR2D2Q9H210 308 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 SPANXB1Q9NS25 103 aaPredicted RBP2.23□□□□□ -2.05
PRPF39-206ENST00000554429 AIG1Q9NVV5 245 aa2.23□□□□□ -2.05
PRPF39-206ENST00000554429 NUDT4Q9NZJ9 180 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms