RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 KRTAP10-11P60412 298 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 TCTEX1D4Q5JR98 221 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 PLAC9Q5JTB6 97 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 SPIN3Q5JUX0 258 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 C10orf99Q6UWK7 81 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 ASCL4Q6XD76 172 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 IL34Q6ZMJ4 242 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 RTN4RL2Q86UN3 420 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 SGPP2Q8IWX5 399 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 MRPL41Q8IXM3 137 aaKnown RBP7.04□□□□□ -1.28
TDP1-208ENST00000553989 FAM58AQ8N1B3 248 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 SVBPQ8N300 66 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 ADAD2Q8NCV1 583 aaKnown RBP7.04□□□□□ -1.28
TDP1-208ENST00000553989 ARL11Q969Q4 196 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 ARHGAP5-AS1Q96IT6 56 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 AQP10Q96PS8 301 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 RTBDNQ9BSG5 229 aaPredicted RBP7.04□□□□□ -1.28
TDP1-208ENST00000553989 ST6GALNAC5Q9BVH7 336 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 PECRQ9BY49 303 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 UBE2J1Q9Y385 318 aaPredicted RBP7.04□□□□□ -1.28
TDP1-208ENST00000553989 PIGBOS1A0A0B4J2F0 54 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 TMEM218A2RU14 115 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 PSMB11A5LHX3 300 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 FOXI3A8MTJ6 420 aaPredicted RBP7.03□□□□□ -1.28
TDP1-208ENST00000553989 M0QZK8 103 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 APOC3P02656 99 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 ZNF44P15621 663 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 CTRB1P17538 263 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 DTYMKP23919 212 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 OR3A1P47881 315 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 OR3A4PP47883 348 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 RBP2P50120 134 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 MTCP1P56278 107 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 IL15RAQ13261 267 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 HES1Q14469 280 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 SMCO1Q147U7 214 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 SLC22A6Q4U2R8 563 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 PXDC1Q5TGL8 231 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 CTRB2Q6GPI1 263 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 DHRS11Q6UWP2 260 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 OSR2Q8N2R0 312 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 TMEM104Q8NE00 496 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 BPIFCQ8NFQ6 507 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 DCUN1D4Q92564 292 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 MRGPRFQ96AM1 343 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 RPEQ96AT9 228 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 WWC2-AS2Q96NR7 200 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 RBM14Q96PK6 669 aaKnown RBP7.03□□□□□ -1.28
TDP1-208ENST00000553989 C5orf66Q9H5L9 145 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 PLEKHA2Q9HB19 425 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 PLEKHJ1Q9NW61 149 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 MBD2Q9UBB5 411 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
TDP1-208ENST00000553989 A0A0A6YYD4 124 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 IGKV1-9A0A0C4DH69 117 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 SH2D1BO14796 132 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 JTBO76095 146 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 OR2H2O95918 312 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 CSTBP04080 98 aaKnown RBP7.02□□□□□ -1.29
TDP1-208ENST00000553989 GAPDHP04406 335 aaKnown RBP7.02□□□□□ -1.29
TDP1-208ENST00000553989 FAM106CPP0CH98 169 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 TMEM225BP0DP42 221 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 PGAM2P15259 253 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 NFYBP25208 207 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 NPBWR2P48146 333 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 PRRX1P54821 245 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 UCP3P55916 312 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 AESQ08117 197 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 ZNF146Q15072 292 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 HMGN3Q15651 99 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 HLA-DRB5Q30154 266 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 LRRC37A5PQ49AS3 106 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 C10orf91Q5T1B1 145 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 TPTE2P1Q5T6R2 138 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 HEPN1Q6WQI6 88 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 LHFPL2Q6ZUX7 228 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 ZNF329Q86UD4 541 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 SPAG16Q8N0X2 631 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 COMMD1Q8N668 190 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 LINC00482Q8N8I6 264 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.02□□□□□ -1.29
TDP1-208ENST00000553989 OR5D18Q8NGL1 313 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 TOMM40LQ969M1 308 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 NICN1Q9BSH3 213 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 MCRIP2Q9BUT9 160 aaKnown RBP7.02□□□□□ -1.29
TDP1-208ENST00000553989 BANF2Q9H503 90 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 ZNF286AQ9HBT8 521 aa7.02□□□□□ -1.29
TDP1-208ENST00000553989 DSCAML1Q8TD84 2053 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 H7C2Y5 167 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 CCSO14618 274 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 ATG12O94817 140 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 SNAPINO95295 136 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 H2AFB1P0C5Y9 115 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 GLP1RP43220 463 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 GLIPR1P48060 266 aa7.01□□□□□ -1.29
TDP1-208ENST00000553989 RPL23AP62750 156 aaKnown RBP7.01□□□□□ -1.29
TDP1-208ENST00000553989 SLC35B1P78383 322 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms