RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 SAP30LQ9HAJ7 183 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 KCNJ16Q9NPI9 418 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM106BQ9NUM4 274 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 RP1L1Q8IWN7 2480 aaPredicted RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 TNCP24821 2201 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SPTBN2O15020 2390 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 A0A087X0M5 115 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 A0A1B0GX30 115 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 F8W036 122 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 M0R1X1 148 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 DNASE2O00115 360 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 CCL21O00585 134 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SOX15O60248 233 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 FCGR3BO75015 233 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 FCN3O75636 299 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SNAPINO95295 136 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 HBE1P02100 147 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 ROS1P08922 2347 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 OR9G9P0C7N8 305 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SELLP14151 372 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 DAOP14920 347 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 LOXP28300 417 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 ATP5IP56385 69 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 RPP30P78346 268 aaKnown RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 MRPS11P82912 194 aaKnown RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 TLE4Q04727 773 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 BTN1A1Q13410 526 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF273Q14593 569 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 GUK1Q16774 197 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SPANXN5Q5MJ07 72 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 AKR1C8PQ5T2L2 129 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 DHRS7BQ6IAN0 325 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 ADAM5Q6NVV9 412 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM71F2Q6NXP2 309 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 ATRAIDQ6UW56 229 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 BTNL3Q6UXE8 466 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM182Q6ZP80 229 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 TGIF2LYQ8IUE0 185 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM217Q8N7C4 229 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 DEFB108BQ8NET1 73 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 OR4S2Q8NH73 311 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SCGB1C1Q8TD33 95 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 DTD1Q8TEA8 209 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 PINX1Q96BK5 328 aaKnown RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 RBMXL1Q96E39 390 aaKnown RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 OR4C12Q96R67 309 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 AIFM2Q9BRQ8 373 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 PBDC1Q9BVG4 233 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 GGACTQ9BVM4 153 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 NKX6-2Q9C056 277 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 WDR61Q9GZS3 305 aaKnown RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SH3BGRL3Q9H299 93 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 GAL3ST2Q9H3Q3 398 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 TREM1Q9NP99 234 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 COQ3Q9NZJ6 369 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 KIAA1456Q9P272 454 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SLC25A10Q9UBX3 287 aaPredicted RBP4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 SH3BGRL2Q9UJC5 107 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 KPTNQ9Y664 436 aa4.93□□□□□ -1.62
VIPAS39-204ENST00000553576 MAP1BP46821 2468 aaKnown RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 C9JQL5 133 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 SLC31A2O15432 143 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 NDUFB3O43676 98 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 MMP23AO75900 390 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 HRASP01112 189 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 MBP02144 154 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 PRH1P02810 166 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ARG1P05089 322 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 METTL15P1P0C7V9 234 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 CT45A6P0DMU7 189 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 CT45A5P0DMU8 189 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 CT45A7P0DMV0 189 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 IAPPP10997 89 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 VDAC2P45880 294 aaPredicted RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ID4P47928 161 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 FHITP49789 147 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 PPOXP50336 477 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF137PP52743 207 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 DLX6P56179 175 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 LINC00205P59089 165 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 RAB2AP61019 212 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 RPL31P62899 125 aaKnown RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ADORA2A-AS1P86434 159 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 DEFA5Q01523 94 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 KRTAP1-1Q07627 177 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 SLC38A11Q08AI6 406 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM249Q2WGJ8 235 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF672Q499Z4 452 aaPredicted RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 RPL39P5Q59GN2 51 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 LRRC10Q5BKY1 277 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM200BQ69YZ2 307 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 DUX4L9Q6RFH8 374 aaPredicted RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF833PQ6ZTB9 187 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 THNSL2Q86YJ6 484 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ZCCHC24Q8N2G6 241 aaKnown RBP4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM216BQ8N7L0 139 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF383Q8NA42 475 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 OR10P1Q8NGE3 313 aa4.92□□□□□ -1.62
VIPAS39-204ENST00000553576 OR10G4Q8NGN3 311 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms