RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 BMI1P35226 326 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 ARL3P36405 182 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 CDK10Q15131 360 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 HSD17B12Q53GQ0 312 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 FAM209BQ5JX69 171 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 LAIR2Q6ISS4 152 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 CLEC19AQ6UXS0 136 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 Q6ZWC4 215 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 GPHB5Q86YW7 130 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 SETD9Q8NE22 299 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 OR10J5Q8NHC4 309 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 OSR1Q8TAX0 266 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-209ENST00000553308 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 PHLDA1Q8WV24 401 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-209ENST00000553308 MAFIPQ8WZ33 124 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 S100A14Q9HCY8 104 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 TP53TG1Q9Y2A0 90 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 ZNF257Q9Y2Q1 563 aa6.75□□□□□ -1.33
SYNE2-209ENST00000553308 TRBV6-7A0A0A0MS04 114 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 TEX22C9J3V5 150 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 SLC17A2O00624 439 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 CREBL2O60519 120 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-209ENST00000553308 FCGR3AP08637 254 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 UCHL1P09936 223 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 APOC4P55056 127 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 CLDN12P56749 244 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 PLA2G7Q13093 441 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 TPBGQ13641 420 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 ANKRD55Q3KP44 614 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 UNQ9165/PRO28630Q6UXU0 137 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 SLC25A42Q86VD7 318 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 MMD2Q8IY49 270 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 MS4A15Q8N5U1 240 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 NANOGP1Q8N7R0 232 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 OR1L6Q8NGR2 347 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 ADTRPQ96IZ2 230 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 FANCD2OSQ96PS1 177 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 UBQLN2Q9UHD9 624 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 PSORS1C1Q9UIG5 152 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 KCNK7Q9Y2U2 307 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 RBM7Q9Y580 266 aaKnown RBP6.74□□□□□ -1.33
SYNE2-209ENST00000553308 PCLOQ9Y6V0 5065 aa6.74□□□□□ -1.33
SYNE2-209ENST00000553308 A0A1B0GW64 132 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 NPIPB5A8MRT5 1133 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 E7EUB6 86 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 FCGR3BO75015 233 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 IL6RP08887 468 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-209ENST00000553308 AREGP15514 252 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 ATF4P18848 351 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-209ENST00000553308 PRR20EP86478 221 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 PRR20CP86479 221 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 PRR20DP86480 221 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 PRR20BP86481 221 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 PRR20AP86496 221 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 RAB11BQ15907 218 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 FAM106AQ4KMX7 169 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 OR2B11Q5JQS5 317 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 VKORC1L1Q8N0U8 176 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 FBLIM1Q8WUP2 373 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 FYTTD1Q96QD9 318 aaKnown RBP6.73□□□□□ -1.33
SYNE2-209ENST00000553308 GINS4Q9BRT9 223 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 DCUN1D5Q9BTE7 237 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 AK6Q9Y3D8 172 aaKnown RBP6.73□□□□□ -1.33
SYNE2-209ENST00000553308 KMT2AQ03164 3969 aa6.73□□□□□ -1.33
SYNE2-209ENST00000553308 TRAV25A0A0B4J276 109 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 IGHV3-35A0A0C4DH35 117 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 DPPA5A6NC42 116 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 MFSD2BA6NFX1 497 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 J3QRK9 145 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 S1PR2O95136 353 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 DIRAS3O95661 229 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 CDK1P06493 297 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 GNAO1P09471 354 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 C8orf88P0DMB2 117 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 RPL35AP18077 110 aaKnown RBP6.72□□□□□ -1.33
SYNE2-209ENST00000553308 FCGR2BP31994 310 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-209ENST00000553308 MAP2K4P45985 399 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 RPL27AP46776 148 aaKnown RBP6.72□□□□□ -1.33
SYNE2-209ENST00000553308 MRPS15P82914 257 aaKnown RBP6.72□□□□□ -1.33
SYNE2-209ENST00000553308 ODF3L2Q3SX64 289 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 ZNF585BQ52M93 769 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 OR4A47Q6IF82 309 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 RBPMS2Q6ZRY4 209 aaKnown RBP6.72□□□□□ -1.33
SYNE2-209ENST00000553308 KCTD9Q7L273 389 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 H1FOOQ8IZA3 346 aaPredicted RBP6.72□□□□□ -1.33
SYNE2-209ENST00000553308 OR2C3Q8N628 320 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 TMEM217Q8N7C4 229 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 BPIFB6Q8NFQ5 453 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 OR56B1Q8NGI3 324 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 TMEM203Q969S6 136 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 EEF1AKMT3Q96AZ1 226 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 RNF183Q96D59 192 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 FKBP14Q9NWM8 211 aa6.72□□□□□ -1.33
SYNE2-209ENST00000553308 IGKV1D-8A0A087WSZ0 117 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 TMEM272A0A1B0GTI8 110 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 UBE2CO00762 179 aa6.71□□□□□ -1.34
SYNE2-209ENST00000553308 DENRO43583 198 aaKnown RBP6.71□□□□□ -1.34
SYNE2-209ENST00000553308 KBTBD11O94819 623 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms