RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 XRCC3O43542 346 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 ACTL6BO94805 426 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 SAA1P0DJI8 122 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-207ENST00000553290 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
ACTN1-207ENST00000553290 MSMO1Q15800 293 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 ACSM6Q6P461 480 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 ZNF66Q6ZN08 573 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 IDO2Q6ZQW0 420 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 MMD2Q8IY49 270 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 MFSD4AQ8N468 514 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 OR4S2Q8NH73 311 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 TCTEX1D2Q8WW35 142 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 SRSF12Q8WXF0 261 aaKnown RBP9.98□□□□□ -0.81
ACTN1-207ENST00000553290 ACOT12Q8WYK0 555 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 USMG5Q96IX5 58 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 COA4Q9NYJ1 87 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 SORL1Q92673 2214 aa9.98□□□□□ -0.81
ACTN1-207ENST00000553290 MPPED1O15442 326 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 LY86O95711 162 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 ZP3P21754 424 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 FCGR2CP31995 323 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 TGFBR1P36897 503 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 RPS19P39019 145 aaKnown RBP9.97□□□□□ -0.81
ACTN1-207ENST00000553290 KIR2DS2P43631 304 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 EIF4EBP1Q13541 118 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-207ENST00000553290 OR2B11Q5JQS5 317 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 UBE2NLQ5JXB2 153 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 OR6Q1Q8NGQ2 317 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 OR13F1Q8NGS4 319 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 VSTM2AQ8TAG5 236 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 OR4C12Q96R67 309 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 SPIN2AQ99865 258 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 SPIN2BQ9BPZ2 258 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 ELOVL1Q9BW60 279 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 ZNF430Q9H8G1 570 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-207ENST00000553290 TAS2R8Q9NYW2 309 aa9.97□□□□□ -0.81
ACTN1-207ENST00000553290 HRASP01112 189 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 PPYP01298 95 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 NHLRC4P0CG21 123 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-207ENST00000553290 APELAP0DMC3 54 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 LSM3P62310 102 aaKnown RBP9.96□□□□□ -0.82
ACTN1-207ENST00000553290 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 ADAD2Q8NCV1 583 aaKnown RBP9.96□□□□□ -0.82
ACTN1-207ENST00000553290 OR5AP2Q8NGF4 316 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 SNAPC3Q92966 411 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 IFT46Q9NQC8 304 aa9.96□□□□□ -0.82
ACTN1-207ENST00000553290 ANKRD34BA5PLL1 514 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 TRIM64CA6NLI5 447 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 OR2A4O95047 310 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 PTHLHP12272 177 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 MAS1LP35410 378 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 TMEM69Q5SWH9 247 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 C11orf87Q6NUJ2 197 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 ZNF343Q6P1L6 599 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 SLC25A42Q86VD7 318 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 PUSL1Q8N0Z8 303 aaKnown RBP9.95□□□□□ -0.82
ACTN1-207ENST00000553290 SAMD12Q8N8I0 201 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 GIMAP1Q8WWP7 306 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
ACTN1-207ENST00000553290 OR2A7Q96R45 310 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 AIFM2Q9BRQ8 373 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 SLC5A7Q9GZV3 580 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 CCL28Q9NRJ3 127 aa9.95□□□□□ -0.82
ACTN1-207ENST00000553290 PEF1Q9UBV8 284 aaKnown RBP9.95□□□□□ -0.82
ACTN1-207ENST00000553290 MEIS3P1A6NDR6 274 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 KBTBD11O94819 623 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 FCER2P06734 321 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 SPNP16150 400 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 BRWD1-AS2P59051 145 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 CATR1Q13166 79 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 DYRK1AQ13627 763 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 KLF5Q13887 457 aaPredicted RBP9.94□□□□□ -0.82
ACTN1-207ENST00000553290 FAM223AQ8IWN6 122 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 VKORC1L1Q8N0U8 176 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 TTC9CQ8N5M4 171 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 TMEM167AQ8TBQ9 72 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 BORCS5Q969J3 196 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 SMAD5-AS1Q9Y6J3 95 aa9.94□□□□□ -0.82
ACTN1-207ENST00000553290 TRBV9A0A0B4J1U6 114 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 RBFOX2O43251 390 aaKnown RBP eCLIP9.93□□□□□ -0.822e-7■■□□□ 14.5
ACTN1-207ENST00000553290 TNFSF12O43508 249 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 GP9P14770 177 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 RPL27AP46776 148 aaKnown RBP9.93□□□□□ -0.82
ACTN1-207ENST00000553290 TAS2R20P59543 309 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 FXYD4P59646 89 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 HERV-K104P61576 105 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 RHOGP84095 191 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 TATDN3Q17R31 274 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 C10orf55Q5SWW7 151 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 ANKRD13BQ86YJ7 626 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 SPAG16Q8N0X2 631 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 CMTM3Q96MX0 182 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 GPHA2Q96T91 129 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 FUNDC2Q9BWH2 189 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 AKIP1Q9NQ31 210 aa9.93□□□□□ -0.82
ACTN1-207ENST00000553290 EHFQ9NZC4 300 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms