RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LINC00596Q86U02 117 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 LYPD1Q8N2G4 141 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 CCDC54Q8NEL0 328 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 OR51T1Q8NGJ9 327 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 OR1L6Q8NGR2 347 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 OTOSQ8NHW6 89 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 DGCR14Q96DF8 476 aaKnown RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 GALNT14Q96FL9 552 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 COQ2Q96H96 371 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 TMEM80Q96HE8 168 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 NMNAT2Q9BZQ4 307 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 RNF167Q9H6Y7 350 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 MAP6D1Q9H9H5 199 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 DNAJC4Q9NNZ3 241 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 AMBNQ9NP70 447 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 CMC2Q9NRP2 79 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 FAM212BQ9NTI7 297 aaPredicted RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 RBFOX1Q9NWB1 397 aaKnown RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 FKBP14Q9NWM8 211 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 RSL24D1Q9UHA3 163 aaKnown RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 FLG2Q5D862 2391 aaPredicted RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 IGLV2-18A0A075B6J9 118 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 A0A1W2PP11 408 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 A0A1W2PPK0 400 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 SDCBPO00560 298 aaPredicted RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 LANCL1O43813 399 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 IGLV3-1P01715 115 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 OCM2P0CE71 109 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 OCMP0CE72 109 aaPredicted RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 BCL3P20749 454 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 PRKACBP22694 351 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 CBLN1P23435 193 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 NPY1RP25929 384 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 PSMB9P28065 219 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 HLA-DMBP28068 263 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 NPBWR1P48145 328 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 PNRC1Q12796 327 aaPredicted RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 PDZK1IP1Q13113 114 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 TMED1Q13445 227 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 FAM106AQ4KMX7 169 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 Q5VSD8 79 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 AADACL4Q5VUY2 407 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 UBE2UQ5VVX9 321 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 ASCL4Q6XD76 172 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 SPATA12Q7Z6I5 190 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 CLVS1Q8IUQ0 354 aaPredicted RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 ADAD2Q8NCV1 583 aaKnown RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 OR5T1Q8NG75 326 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 OR13F1Q8NGS4 319 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 THAP6Q8TBB0 222 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 RAB2BQ8WUD1 216 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 ASB17Q8WXJ9 295 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 GGHQ92820 318 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 ARL11Q969Q4 196 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 AMELYQ99218 206 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 RNF5Q99942 180 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 MND1Q9BWT6 205 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 COMMD4Q9H0A8 199 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 RBM38Q9H0Z9 239 aaKnown RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 NEK6Q9HC98 313 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 GPN1Q9HCN4 374 aaPredicted RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 ACOT13Q9NPJ3 140 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 FAM206AQ9NX38 181 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 WARS2Q9UGM6 360 aaKnown RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 NUFIP1Q9UHK0 495 aaKnown RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 KIF25Q9UIL4 384 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 DIMT1Q9UNQ2 313 aaKnown RBP3.77□□□□□ -1.81
CKAP4-203ENST00000553039 V9GYS6 101 aa3.77□□□□□ -1.81
CKAP4-203ENST00000553039 DEFB131BA0A096LNP1 70 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 A6NIN4 97 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 C2orf70A6NJV1 201 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 FCN1O00602 326 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ORC5O43913 435 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 NDUFA3O95167 84 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 CALCBP10092 127 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 RPL35AP18077 110 aaKnown RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ALOX5APP20292 161 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 DCKP27707 260 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF137PP52743 207 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 RIDAP52758 137 aaKnown RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 GBX2P52951 348 aaPredicted RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 TMBIM6P55061 237 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ATP5G2Q06055 141 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 CRMP1Q14194 572 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ATXN7L3Q14CW9 347 aaPredicted RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 UBE2V2Q15819 145 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 CNPY1Q3B7I2 92 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 TIMM50Q3ZCQ8 353 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 PAN3Q58A45 887 aaKnown RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 SLC35D3Q5M8T2 416 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 SYT6Q5T7P8 510 aaPredicted RBP3.76□□□□□ -1.81
CKAP4-203ENST00000553039 LINC01590Q5TEZ4 76 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 GPR107Q5VW38 600 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 LAMTOR1Q6IAA8 161 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 OR4A47Q6IF82 309 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 Q6P435 159 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 ZNF679Q8IYX0 411 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 BBS1Q8NFJ9 593 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 OR52I1Q8NGK6 324 aa3.76□□□□□ -1.81
CKAP4-203ENST00000553039 OSR1Q8TAX0 266 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms