RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 C19orf35Q6ZS72 473 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 VKORC1L1Q8N0U8 176 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 ADTRPQ96IZ2 230 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 FAM110AQ9BQ89 295 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 PEMTQ9UBM1 199 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 DYNC2H1Q8NCM8 4307 aaKnown RBP8.7□□□□□ -1.02
NEK3-204ENST00000552973 TENM2Q9NT68 2774 aa8.7□□□□□ -1.02
NEK3-204ENST00000552973 TRAV1-2A0A0B4J238 106 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 METTL21EPA6NDL7 271 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 PPP5D1E7EU14 171 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 OR2A4O95047 310 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 IGHV3-23P01764 117 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 HLA-AP01891 365 aaKnown RBP8.69□□□□□ -1.02
NEK3-204ENST00000552973 RAB3BP20337 219 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 RAB6AP20340 208 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 MECP2P51608 486 aaKnown RBP8.69□□□□□ -1.02
NEK3-204ENST00000552973 RPL30P62888 115 aaKnown RBP8.69□□□□□ -1.02
NEK3-204ENST00000552973 CD300EQ496F6 205 aaPredicted RBP8.69□□□□□ -1.02
NEK3-204ENST00000552973 CDNFQ49AH0 187 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 C22orf42Q6IC83 251 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 ZNF367Q7RTV3 350 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 NR2C2APQ86WQ0 139 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 OSR1Q8TAX0 266 aaPredicted RBP8.69□□□□□ -1.02
NEK3-204ENST00000552973 CNBD2Q96M20 576 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 SIGLEC8Q9NYZ4 499 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 S4R3C0 116 aa8.69□□□□□ -1.02
NEK3-204ENST00000552973 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.68□□□□□ -1.02
NEK3-204ENST00000552973 OR2C1O95371 312 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 DIRAS3O95661 229 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 CD7P09564 240 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 CDK10Q15131 360 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 GUCA2BQ16661 112 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 TTC9CQ8N5M4 171 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 DEFB125Q8N687 156 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 ZNF645Q8N7E2 425 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 DYNLRB2Q8TF09 96 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 FYTTD1Q96QD9 318 aaKnown RBP8.68□□□□□ -1.02
NEK3-204ENST00000552973 SPIN2AQ99865 258 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 SPIN2BQ9BPZ2 258 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 NEURL2Q9BR09 285 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 WFDC10AQ9H1F0 79 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 CEPT1Q9Y6K0 416 aa8.68□□□□□ -1.02
NEK3-204ENST00000552973 TRBV9A0A0B4J1U6 114 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 IGKV1D-13A0A0B4J2D9 117 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 TRDV1A0A1B0GX56 115 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 FAM223BA6NKX1 122 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 ZNF785A8K8V0 405 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 E7EUB6 86 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 TPPPO94811 219 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 IGLV2-14P01704 120 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 IGKV1-13P0DP09 117 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 TBCEQ15813 527 aaPredicted RBP8.67□□□□□ -1.02
NEK3-204ENST00000552973 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 C15orf32Q32M92 178 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 Q6ZS49 121 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 KCTD9Q7L273 389 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 FAM223AQ8IWN6 122 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 MMD2Q8IY49 270 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 NUDCD2Q8WVJ2 157 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 GPHA2Q96T91 129 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 OR51E2Q9H255 320 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 NDUFB11Q9NX14 153 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 FBXL7Q9UJT9 491 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 SPATA2Q9UM82 520 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 RBMX2Q9Y388 322 aaKnown RBP8.67□□□□□ -1.02
NEK3-204ENST00000552973 OR2W1Q9Y3N9 320 aa8.67□□□□□ -1.02
NEK3-204ENST00000552973 DPPA5A6NC42 116 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 RBMY1BA6NDE4 496 aaKnown RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 RBMY1EA6NEQ0 496 aaKnown RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 TMEM235A6NFC5 223 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 TEX22C9J3V5 150 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 AIREO43918 545 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 CREBL2O60519 120 aaPredicted RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 NDUFB8O95169 186 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 HLA-DQB1P01920 261 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 IL6RP08887 468 aaPredicted RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 RBMY1DP0C7P1 496 aaKnown RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 MYOD1P15172 320 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 DTYMKP23919 212 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 HACD4Q5VWC8 232 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 IZUMO2Q6UXV1 221 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 SSX9Q7RTT3 188 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 NECAP1Q8NC96 275 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 OR2K2Q8NGT1 345 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 TCTEX1D2Q8WW35 142 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 WDR89Q96FK6 387 aaPredicted RBP8.66□□□□□ -1.02
NEK3-204ENST00000552973 CENPOQ9BU64 300 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 SLC2A8Q9NY64 477 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 TAS2R8Q9NYW2 309 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 PRELID3BQ9Y3B1 194 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 DMRT1Q9Y5R6 373 aa8.66□□□□□ -1.02
NEK3-204ENST00000552973 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 OR11H12B2RN74 326 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 TNFSF12O43508 249 aa8.65□□□□□ -1.02
NEK3-204ENST00000552973 GGCTO75223 188 aaKnown RBP8.65□□□□□ -1.02
NEK3-204ENST00000552973 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms