RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	FCN3	O75636	299 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	IFNA17	P01571	189 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	GNB2	P62879	340 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RPL31	P62899	125 aa	Known RBP	11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CBLN2	Q8IUK8	224 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF383	Q8NA42	475 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RBMXL1	Q96E39	390 aa	Known RBP	11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	GAL3ST2	Q9H3Q3	398 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	VSIR	Q9H7M9	311 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TMEM140	Q9NV12	185 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TIMM9	Q9Y5J7	89 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ROS1	P08922	2347 aa		11.52	□□□□□ -0.57
RAB3IP-216	ENST00000552199	C15orf62	A8K5M9	175 aa		11.51	□□□□□ -0.57
RAB3IP-216	ENST00000552199	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.51	□□□□□ -0.57
RAB3IP-216	ENST00000552199	LYPD2	Q6UXB3	125 aa		11.51	□□□□□ -0.57
RAB3IP-216	ENST00000552199	MBD3L1	Q8WWY6	194 aa		11.51	□□□□□ -0.57
RAB3IP-216	ENST00000552199	POLE	Q07864	2286 aa		11.51	□□□□□ -0.57
RAB3IP-216	ENST00000552199	IGF2R	P11717	2491 aa		11.51	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TRAV3	A0A0B4J244	114 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	PLAU	P00749	431 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	VWC2	Q2TAL6	325 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TMEM41B	Q5BJD5	291 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TMEM200B	Q69YZ2	307 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZCCHC14	Q8WYQ9	949 aa	Known RBP	11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	NDUFB3	O43676	98 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	SCAF4	O95104	1147 aa	Known RBP	11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	OR13C7	P0DN81	318 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	DAO	P14920	347 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	GRN	P28799	593 aa	Known RBP	11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RPS16	P62249	146 aa	Known RBP	11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF726P1	Q15940	193 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	HAGH	Q16775	308 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF506	Q5JVG8	444 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	HEPN1	Q6WQI6	88 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF429	Q86V71	674 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CLDND2	Q8NHS1	167 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF714	Q96N38	554 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CISD1	Q9NZ45	108 aa	Known RBP	11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ARFGEF3	Q5TH69	2177 aa		11.5	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TET2	Q6N021	2002 aa	Predicted RBP	11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	IGHV1-69-2	A0A0G2JMI3	117 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ARG1	P05089	322 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CCL3L1	P16619	93 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	VDAC2	P45880	294 aa	Predicted RBP	11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ERVFRD-1	P60508	538 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RPP30	P78346	268 aa	Known RBP	11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ICAM4	Q14773	271 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	LRRC10	Q5BKY1	277 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RHOV	Q96L33	236 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CLCC1	Q96S66	551 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	KAAG1	Q9UBP8	84 aa		11.49	□□□□□ -0.57
RAB3IP-216	ENST00000552199	SRP19	P09132	144 aa	Known RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CT45A6	P0DMU7	189 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CT45A5	P0DMU8	189 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CT45A7	P0DMV0	189 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	FGF7	P21781	194 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ELL	P55199	621 aa	Predicted RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ADORA2A-AS1	P86434	159 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	POU2AF1	Q16633	256 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	OR4A47	Q6IF82	309 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	H1FX	Q92522	213 aa	Known RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RCC1L	Q96I51	464 aa	Known RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	AIFM2	Q9BRQ8	373 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CTSZ	Q9UBR2	303 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	C15orf61	A6NNL5	157 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	DVL1	O14640	695 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	HRAS	P01112	189 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	HSPB1	P04792	205 aa	Known RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	MDK	P21741	143 aa	Predicted RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	SOHLH1	Q5JUK2	328 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF787	Q6DD87	383 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	LCN15	Q6UWW0	184 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	SSX7	Q7RTT5	188 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	HEYL	Q9NQ87	328 aa	Predicted RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNRD1	Q9P1U0	126 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TCF19	Q9Y242	345 aa		11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	FOXA2	Q9Y261	457 aa	Predicted RBP	11.48	□□□□□ -0.57
RAB3IP-216	ENST00000552199	PKDREJ	Q9NTG1	2253 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	SIAH2	O43255	324 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	NDUFA2	O43678	99 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	IFNA10	P01566	189 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TFF3	Q07654	80 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	KHDC3L	Q587J8	217 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ACSM6	Q6P461	480 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ZNF833P	Q6ZTB9	187 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RXFP4	Q8TDU9	374 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	SLC35D1	Q9NTN3	355 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	TMEM14B	Q9NUH8	114 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	LOC102723971	A0A1B0GUV8	181 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	IGKV1D-33	P01593	117 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	IGKV1-33	P01594	117 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	LOX	P28300	417 aa	Predicted RBP	11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	HNF4G	Q14541	408 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	CDSN	Q15517	529 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	RTL8B	Q17RB0	113 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	AKIRIN2	Q53H80	203 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	AWAT1	Q58HT5	328 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	ETV3L	Q6ZN32	361 aa		11.47	□□□□□ -0.57
RAB3IP-216	ENST00000552199	UNKL	Q9H9P5	680 aa	Known RBP	11.47	□□□□□ -0.57

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