RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 C12orf4Q9NQ89 552 aa7.62□□□□□ -1.19
SLC48A1-209ENST00000552003 PARP11Q9NR21 331 aa7.62□□□□□ -1.19
SLC48A1-209ENST00000552003 ETAA1Q9NY74 926 aa7.62□□□□□ -1.19
SLC48A1-209ENST00000552003 A0A1W2PN81 502 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 TMEM235A6NFC5 223 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 ZNF729A6NN14 1252 aaPredicted RBP7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 GAPDHP04406 335 aaKnown RBP7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 EGR2P11161 476 aaPredicted RBP7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 CD1BP29016 333 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 CHRNA7P36544 502 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 CBX5P45973 191 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 SYNJ2BPP57105 145 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 KRBOX4Q5JUW0 171 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 RSBN1Q5VWQ0 802 aaPredicted RBP7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 ZNF497Q6ZNH5 498 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 OR13A1Q8NGR1 328 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 RFESDQ8TAC1 157 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 CMSS1Q9BQ75 279 aaKnown RBP7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 NCOR1P1Q9H4R4 102 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 SCPEP1Q9HB40 452 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 AK3Q9UIJ7 227 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 MRPS7Q9Y2R9 242 aaKnown RBP7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
SLC48A1-209ENST00000552003 NPIPB11E5RHQ5 1161 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 SULT1C2O00338 296 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 CTDSPLO15194 276 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 DTYMKP23919 212 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 PRSS3P35030 304 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 ECSCRQ19T08 205 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 CD300EQ496F6 205 aaPredicted RBP7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 C6orf183Q5T699 404 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 TRAT1Q6PIZ9 186 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 SNX29P2Q8IUI4 249 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 PLPPR1Q8TBJ4 325 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 MRPL30Q8TCC3 161 aaKnown RBP7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 NUDCD2Q8WVJ2 157 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 RTN4IP1Q8WWV3 396 aaPredicted RBP7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 RNF183Q96D59 192 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 MS4A10Q96PG2 267 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 WDR12Q9GZL7 423 aaKnown RBP7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 LINC00574Q9H8X3 128 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 IFT46Q9NQC8 304 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 CALYQ9NYX4 217 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 IDI2-AS1Q9NZ38 188 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 SLC23A1Q9UHI7 598 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 MGAT4AQ9UM21 535 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 KCNK7Q9Y2U2 307 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 V9GYH0 126 aa7.6□□□□□ -1.19
SLC48A1-209ENST00000552003 MEIKINA0A087WXM9 373 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 TRBV6-6A0A0A6YYG2 114 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 GABARAPH6UMI1 98 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 NDUFB8O95169 186 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 NAPSAO96009 420 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 HLA-DQB1P01920 261 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 MT-ND4P03905 459 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 FCGR3AP08637 254 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 EDN2P20800 178 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 GLP1RP43220 463 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 NANOS2P60321 138 aaKnown RBP7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 ACTBP60709 375 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 PYDC2Q56P42 97 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 GAPTQ8N292 157 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 OR8H1Q8NGG4 311 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 OR10X1Q8NGY0 326 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 SETD6Q8TBK2 473 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 SMIM4Q8WVI0 70 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 FCAMRQ8WWV6 532 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 SOSTQ9BQB4 213 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 RAB9BQ9NP90 201 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 AKIP1Q9NQ31 210 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 KCNIP1Q9NZI2 227 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 KIF25Q9UIL4 384 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 TRAPPC2LQ9UL33 140 aa7.59□□□□□ -1.19
SLC48A1-209ENST00000552003 TRAV39A0A0B4J263 110 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 M0R2N4 97 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 GSTZ1O43708 216 aaPredicted RBP7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 SSX5O60225 188 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 TRBV12-3P01733 135 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 PTHLHP12272 177 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 SSTR5P35346 364 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 CRIP2P52943 208 aaPredicted RBP7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 SSBP1Q04837 148 aaKnown RBP7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 LSAMPQ13449 338 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF846Q147U1 533 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF79Q15937 498 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF880Q6PDB4 577 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF554Q86TJ5 538 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 MFSD4AQ8N468 514 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 GDPD1Q8N9F7 314 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ZNF565Q8N9K5 539 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 OR4K15Q8NH41 348 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 GPX8Q8TED1 209 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ABHD1Q96SE0 405 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 TSC22D3Q99576 134 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 HDHD3Q9BSH5 251 aaPredicted RBP7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 GGTLC1Q9BX51 225 aa7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 MBNL3Q9NUK0 354 aaKnown RBP7.58□□□□□ -1.2
SLC48A1-209ENST00000552003 ELF5Q9UKW6 265 aaPredicted RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms