RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 FAM103A1Q9BTL3 118 aaKnown RBP12.83□□□□□ -0.36
GCN1-209ENST00000551920 WSB1Q9Y6I7 421 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
GCN1-209ENST00000551920 M0QZ24 198 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
GCN1-209ENST00000551920 PI3P19957 117 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 VDAC1P21796 283 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 PPIFP30405 207 aaKnown RBP12.82□□□□□ -0.36
GCN1-209ENST00000551920 KIR2DS2P43631 304 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 UCP3P55916 312 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 C2orf68Q2NKX9 166 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 NSUN5P1Q3KNT7 163 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 PYDC2Q56P42 97 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 ZNF562Q6V9R5 426 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 NDUFA11Q86Y39 141 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 SRRQ9GZT4 340 aa12.82□□□□□ -0.36
GCN1-209ENST00000551920 TET2Q6N021 2002 aaPredicted RBP12.82□□□□□ -0.36
GCN1-209ENST00000551920 TRAV41A0A0B4J266 112 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 A0A1W2PRX2 142 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 PLXNB1O43157 2135 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 SOX15O60248 233 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 S1PR2O95136 353 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 IGHG4P01861 327 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 AKAIN1P0CW23 69 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 GNB1P62873 340 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 CATR1Q13166 79 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 KLF9Q13886 244 aaPredicted RBP12.81□□□□□ -0.36
GCN1-209ENST00000551920 PRSS8Q16651 343 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 ECSCRQ19T08 205 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 VMA21Q3ZAQ7 101 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 SCGB2B2Q4G0G5 96 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 C18orf65Q6ZTR6 163 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 SLC38A6Q8IZM9 456 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 Q8N402 240 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 TEX45Q8NA69 505 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 GRPEL2Q8TAA5 225 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 ARPC1AQ92747 370 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 THAP7Q9BT49 309 aaPredicted RBP12.81□□□□□ -0.36
GCN1-209ENST00000551920 ZNF430Q9H8G1 570 aaPredicted RBP12.81□□□□□ -0.36
GCN1-209ENST00000551920 SLC2A9Q9NRM0 540 aa12.81□□□□□ -0.36
GCN1-209ENST00000551920 TCRBV4S1A1TA0A5B7 111 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 SLC35B1P78383 322 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 FXYD3Q14802 87 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 MEF2DQ14814 521 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 ZNF585BQ52M93 769 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 SPANXN2Q5MJ10 180 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 C10orf55Q5SWW7 151 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 CMTM1Q8IZ96 169 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 PUSL1Q8N0Z8 303 aaKnown RBP12.8□□□□□ -0.36
GCN1-209ENST00000551920 RNF152Q8N8N0 203 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 MINDY2Q8NBR6 621 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 OR13C8Q8NGS7 320 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 TERB2Q8NHR7 220 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 RHOVQ96L33 236 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 NUBP2Q9Y5Y2 271 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 WNK1Q9H4A3 2382 aa12.8□□□□□ -0.36
GCN1-209ENST00000551920 IGLV1-40P01703 118 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 RPLP1P05386 114 aaKnown RBP12.79□□□□□ -0.36
GCN1-209ENST00000551920 PGAM2P15259 253 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 PTBP1P26599 531 aaKnown RBP eCLIP12.79□□□□□ -0.36
GCN1-209ENST00000551920 PSMB8P28062 276 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 FOXE3Q13461 319 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 CNPY1Q3B7I2 92 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 KHDC1LQ5JSQ8 128 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 ASPHD1Q5U4P2 390 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 TBC1D26Q86UD7 250 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 COMMD1Q8N668 190 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 OR51S1Q8NGJ8 323 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 MARCH1Q8TCQ1 289 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 ABHD5Q8WTS1 349 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 SDHCQ99643 169 aaPredicted RBP12.79□□□□□ -0.36
GCN1-209ENST00000551920 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 KLK15Q9H2R5 256 aa12.79□□□□□ -0.36
GCN1-209ENST00000551920 TSSC4Q9Y5U2 329 aaPredicted RBP12.79□□□□□ -0.36
GCN1-209ENST00000551920 KBTBD11O94819 623 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 OPN1MWP04001 364 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 OPN1MW2P0DN77 364 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 OPN1MW3P0DN78 364 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 F2RP25116 425 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 RND3P61587 244 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 RPL23AP62750 156 aaKnown RBP12.78□□□□□ -0.36
GCN1-209ENST00000551920 POU2AF1Q16633 256 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 OR4A47Q6IF82 309 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 LPCAT3Q6P1A2 487 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 LFNGQ8NES3 379 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 TMEM167AQ8TBQ9 72 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 CASTOR1Q8WTX7 329 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 PLEKHA2Q9HB19 425 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 SLC2A8Q9NY64 477 aa12.78□□□□□ -0.36
GCN1-209ENST00000551920 A0A1B0GW64 132 aa12.77□□□□□ -0.37
GCN1-209ENST00000551920 A0A1W2PN81 502 aa12.77□□□□□ -0.37
GCN1-209ENST00000551920 DISC1C4P0D8 188 aa12.77□□□□□ -0.37
GCN1-209ENST00000551920 OR2A4O95047 310 aa12.77□□□□□ -0.37
GCN1-209ENST00000551920 CNIH1O95406 144 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms