RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 MUL1Q969V5 352 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 HARBI1Q96MB7 349 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 BABAM2Q9NXR7 383 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 UBQLN2Q9UHD9 624 aa8.75□□□□□ -1.01
PTCH1-222ENST00000551425 OR2J3O76001 311 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 NAPSAO96009 420 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 ARL3P36405 182 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 CEACAM6P40199 344 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 GTF2A1P52655 376 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-222ENST00000551425 TAS2R43P59537 309 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 MED22Q15528 200 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 TNXAQ16473 311 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 PRSS8Q16651 343 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 LGALS9BQ3B8N2 356 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 ODF3L2Q3SX64 289 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 RPL22L1Q6P5R6 122 aaKnown RBP8.74□□□□□ -1.01
PTCH1-222ENST00000551425 ORAI1Q96D31 301 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 HRH4Q9H3N8 390 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 C5orf66Q9H5L9 145 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 OR1A1Q9P1Q5 309 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF221Q9UK13 617 aa8.74□□□□□ -1.01
PTCH1-222ENST00000551425 A0A087WXM4 84 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 SRRM4A7MD48 611 aaKnown RBP8.73□□□□□ -1.01
PTCH1-222ENST00000551425 TSPAN4O14817 238 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 CRTAPO75718 401 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-222ENST00000551425 SCTP09683 121 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 ZBTB25P24278 435 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 SPHARQ15513 63 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 TBCEQ15813 527 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-222ENST00000551425 AWAT2Q6E213 333 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF773Q6PK81 442 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 MOB1BQ7L9L4 216 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 CDH26Q8IXH8 852 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 SPARTQ8N0X7 666 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 JAGN1Q8N5M9 183 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF645Q8N7E2 425 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 TEX45Q8NA69 505 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.73□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF485Q8NCK3 441 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 OR11H2Q8NH07 326 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 CCDC140Q96MF4 163 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 SPIN2AQ99865 258 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 SPIN2BQ9BPZ2 258 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 CSTL1Q9H114 145 aa8.73□□□□□ -1.01
PTCH1-222ENST00000551425 MRPL27Q9P0M9 148 aaKnown RBP8.73□□□□□ -1.01
PTCH1-222ENST00000551425 IGHV4-4A0A075B6R2 117 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 TRAV8-7A0A075B6U6 113 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 MPTX1A8MV57 137 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 M0R1X1 148 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 M0R2N4 97 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 SHOXO15266 292 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 OGG1O15527 345 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 S1PR2O95136 353 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 GALP22466 123 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 ADMP35318 185 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 TAGLNQ01995 201 aaKnown RBP8.72□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF585BQ52M93 769 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 CLEC19AQ6UXS0 136 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 UNQ9165/PRO28630Q6UXU0 137 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF367Q7RTV3 350 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 SLC25A42Q86VD7 318 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 NR2C2APQ86WQ0 139 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 Q8N1X5 172 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 TSPAN14Q8NG11 270 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 FCGR1BQ92637 280 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 NEDD4LQ96PU5 975 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 FAAP24Q9BTP7 215 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 ACOT13Q9NPJ3 140 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 CKLFQ9UBR5 152 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 ZNF257Q9Y2Q1 563 aa8.72□□□□□ -1.01
PTCH1-222ENST00000551425 LSM2Q9Y333 95 aaKnown RBP8.72□□□□□ -1.01
PTCH1-222ENST00000551425 DEFB4AO15263 64 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 ELLP55199 621 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-222ENST00000551425 UBE2KP61086 200 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 CBX3Q13185 183 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 VMA21Q3ZAQ7 101 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 PVRIGQ6DKI7 326 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 XAF1Q6GPH4 301 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 ACOT12Q8WYK0 555 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 RNF126Q9BV68 326 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 C6orf62Q9GZU0 229 aaPredicted RBP8.71□□□□□ -1.02
PTCH1-222ENST00000551425 VCX3AQ9NNX9 186 aa8.71□□□□□ -1.02
PTCH1-222ENST00000551425 TRBV6-6A0A0A6YYG2 114 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 TRAV10A0A0B4J240 114 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 TRBV5-5A0A0J9YX44 114 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 LALBAP00709 142 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 IGHV3-23P01764 117 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 CD1AP06126 327 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 HSMCR30P0CW71 290 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 P0DMU3 169 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 FAM231AP0DMU4 169 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 FAM231CP0DMU5 169 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 MYOD1P15172 320 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 CELP19835 753 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 PSMB6P28072 239 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 MLLT11Q13015 90 aaPredicted RBP8.7□□□□□ -1.02
PTCH1-222ENST00000551425 RTL8BQ17RB0 113 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 UBE2UQ5VVX9 321 aa8.7□□□□□ -1.02
PTCH1-222ENST00000551425 C6orf201Q7Z4U5 140 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms