RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PRH1P02810 166 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TRGV3P03979 118 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 RRASP10301 218 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 NAT1P18440 290 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TPPP2P59282 170 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 RUNX1Q01196 453 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TMEM267Q0VDI3 215 aaPredicted RBP7.55□□□□□ -1.2
HDAC7-229ENST00000549883 SPCS2Q15005 226 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 CDK10Q15131 360 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TNXAQ16473 311 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 VMA21Q3ZAQ7 101 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF818PQ6ZRF7 136 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TMEM17Q86X19 198 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 SNX29P2Q8IUI4 249 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 TEX45Q8NA69 505 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 OR5M8Q8NGP6 311 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 OSR1Q8TAX0 266 aaPredicted RBP7.55□□□□□ -1.2
HDAC7-229ENST00000549883 GPX8Q8TED1 209 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 ACOT12Q8WYK0 555 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
HDAC7-229ENST00000549883 KCTD12Q96CX2 325 aaKnown RBP7.55□□□□□ -1.2
HDAC7-229ENST00000549883 MRPS26Q9BYN8 205 aaKnown RBP7.55□□□□□ -1.2
HDAC7-229ENST00000549883 SLC5A7Q9GZV3 580 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 IFT46Q9NQC8 304 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF355PQ9NSJ1 428 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 EHFQ9NZC4 300 aa7.55□□□□□ -1.2
HDAC7-229ENST00000549883 SORL1Q92673 2214 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 TRAV3A0A0B4J244 114 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 HMX3A6NHT5 357 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 SEC14L6B5MCN3 397 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 DUS4LO95620 317 aaKnown RBP7.54□□□□□ -1.2
HDAC7-229ENST00000549883 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 APOA1P02647 267 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 LGALS1P09382 135 aaKnown RBP7.54□□□□□ -1.2
HDAC7-229ENST00000549883 HLA-DMAP28067 261 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 PRSS3P35030 304 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 CBX5P45973 191 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 RORCP51449 518 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF45Q02386 682 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF616Q08AN1 781 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 CBX3Q13185 183 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 SSX9Q7RTT3 188 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 REC114Q7Z4M0 266 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 PUSL1Q8N0Z8 303 aaKnown RBP7.54□□□□□ -1.2
HDAC7-229ENST00000549883 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 POC5Q8NA72 575 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 GIMAP1Q8WWP7 306 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 SRSF12Q8WXF0 261 aaKnown RBP7.54□□□□□ -1.2
HDAC7-229ENST00000549883 RHOVQ96L33 236 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 PRR25Q96S07 402 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 HSD17B10Q99714 261 aaKnown RBP7.54□□□□□ -1.2
HDAC7-229ENST00000549883 FXYD6Q9H0Q3 95 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 MIXL1Q9H2W2 232 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 ADAM30Q9UKF2 790 aa7.54□□□□□ -1.2
HDAC7-229ENST00000549883 ANKRD34BA5PLL1 514 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 SLC22A5O76082 557 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 RPA2P15927 270 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 GNRHRP30968 328 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 HRH1P35367 487 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 DYRK1AQ13627 763 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 DHRS11Q6UWP2 260 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF66Q6ZN08 573 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 GPR141Q7Z602 305 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 ADAD2Q8NCV1 583 aaKnown RBP7.53□□□□□ -1.2
HDAC7-229ENST00000549883 OR5H2Q8NGV7 314 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 OR51H1Q8NH63 302 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 DPF1Q92782 380 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 PHB2Q99623 299 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 ZNF2Q9BSG1 426 aaPredicted RBP7.53□□□□□ -1.2
HDAC7-229ENST00000549883 MCRIP2Q9BUT9 160 aaKnown RBP7.53□□□□□ -1.2
HDAC7-229ENST00000549883 COA4Q9NYJ1 87 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 PRELID3BQ9Y3B1 194 aa7.53□□□□□ -1.2
HDAC7-229ENST00000549883 DNAH3Q8TD57 4116 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 FAM25AB3EWG3 89 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 FAM25CB3EWG5 89 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 FAM25GB3EWG6 89 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 TEX22C9J3V5 150 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 LINC01619G3V211 115 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 M0QYG6 137 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 CTDSP2O14595 271 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 KBTBD11O94819 623 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 S1PR2O95136 353 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 IL6RP08887 468 aaPredicted RBP7.52□□□□□ -1.21
HDAC7-229ENST00000549883 OR8U8P0C7N1 319 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 ZNF182P17025 639 aaPredicted RBP7.52□□□□□ -1.21
HDAC7-229ENST00000549883 DEFB121Q5J5C9 76 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 OR4A47Q6IF82 309 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 PYHIN1Q6K0P9 492 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 HAPLN4Q86UW8 402 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 CLVS1Q8IUQ0 354 aaPredicted RBP7.52□□□□□ -1.21
HDAC7-229ENST00000549883 SPAG16Q8N0X2 631 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 OR4S2Q8NH73 311 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 TMEM167AQ8TBQ9 72 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 MOB3AQ96BX8 217 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 ABHD1Q96SE0 405 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 TINAGL1Q9GZM7 467 aaPredicted RBP7.52□□□□□ -1.21
HDAC7-229ENST00000549883 SLA2Q9H6Q3 261 aa7.52□□□□□ -1.21
HDAC7-229ENST00000549883 OVOL1O14753 267 aa7.51□□□□□ -1.21
HDAC7-229ENST00000549883 PGLYRP1O75594 196 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms