RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 HLA-DQB1P01920 261 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 NHLRC4P0CG21 123 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-207ENST00000549752 ZP3P21754 424 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 CBX5P45973 191 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 MECP2P51608 486 aaKnown RBP8.08□□□□□ -1.12
CCDC38-207ENST00000549752 ARPC4P59998 168 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 UBE2KP61086 200 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 VAX1Q5SQQ9 334 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 KCTD9Q7L273 389 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 OR6Q1Q8NGQ2 317 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 VSTM2AQ8TAG5 236 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 NUDCD2Q8WVJ2 157 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 DCUN1D4Q92564 292 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 BORCS5Q969J3 196 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 DCUN1D5Q9BTE7 237 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 ELOVL1Q9BW60 279 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 RANGRFQ9HD47 186 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-207ENST00000549752 SPATA2Q9UM82 520 aa8.08□□□□□ -1.12
CCDC38-207ENST00000549752 ZNF256Q9Y2P7 627 aaPredicted RBP8.08□□□□□ -1.12
CCDC38-207ENST00000549752 TRAV18A0A075B6X5 111 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 A0A087WXM4 84 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 MPPED1O15442 326 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 TNFAIP8O95379 198 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 IGLV2-23P01705 113 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 CRYGBP07316 175 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 LINC00205P59089 165 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 FAM209BQ5JX69 171 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 ZNF66Q6ZN08 573 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 MMD2Q8IY49 270 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 BEST4Q8NFU0 473 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 OR4S2Q8NH73 311 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 DDB2Q92466 427 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 USMG5Q96IX5 58 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 MS4A10Q96PG2 267 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 OR4C12Q96R67 309 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 SPIN2AQ99865 258 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 SPIN2BQ9BPZ2 258 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 TPSG1Q9NRR2 321 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 SCOCQ9UIL1 159 aa8.07□□□□□ -1.12
CCDC38-207ENST00000549752 IGKV1D-8A0A087WSZ0 117 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 AIREO43918 545 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 FCGR3BO75015 233 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 SAP30O75446 220 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 TUSC2O75896 110 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 LY86O95711 162 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 IGHV3-11P01762 117 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 NFYAP23511 347 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-207ENST00000549752 KIR2DS2P43631 304 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 SLURP1P55000 103 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 CDK10Q15131 360 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 MSMO1Q15800 293 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 TNXAQ16473 311 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 PRSS8Q16651 343 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 TATDN3Q17R31 274 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 ASPHD1Q5U4P2 390 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 OVCH2Q7RTZ1 564 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 SLC25A42Q86VD7 318 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 ZBTB34Q8NCN2 500 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 OR5T1Q8NG75 326 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 ACOT12Q8WYK0 555 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 DLX4Q92988 240 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-207ENST00000549752 S100A16Q96FQ6 103 aaKnown RBP8.06□□□□□ -1.12
CCDC38-207ENST00000549752 COA4Q9NYJ1 87 aa8.06□□□□□ -1.12
CCDC38-207ENST00000549752 ELF5Q9UKW6 265 aaPredicted RBP8.06□□□□□ -1.12
CCDC38-207ENST00000549752 RBMX2Q9Y388 322 aaKnown RBP8.06□□□□□ -1.12
CCDC38-207ENST00000549752 IGHV4OR15-8A0A075B7B6 117 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 A0A087WW49 117 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 LINC00473A8K010 186 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 J3QRK9 145 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 HRASP01112 189 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 OR9G9P0C7N8 305 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 MAS1LP35410 378 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 PJVKQ0ZLH3 352 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 ACSM6Q6P461 480 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 HOGA1Q86XE5 327 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 TSPAN14Q8NG11 270 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 CASTOR1Q8WTX7 329 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 TCTEX1D2Q8WW35 142 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 SRSF12Q8WXF0 261 aaKnown RBP8.05□□□□□ -1.12
CCDC38-207ENST00000549752 MISP3Q96FF7 219 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 C5orf30Q96GV9 206 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 TINAGL1Q9GZM7 467 aaPredicted RBP8.05□□□□□ -1.12
CCDC38-207ENST00000549752 ALX4Q9H161 411 aaPredicted RBP8.05□□□□□ -1.12
CCDC38-207ENST00000549752 IFT46Q9NQC8 304 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 SMAD5-AS1Q9Y6J3 95 aa8.05□□□□□ -1.12
CCDC38-207ENST00000549752 MSGN1A6NI15 193 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 FAM223BA6NKX1 122 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 SRRM4A7MD48 611 aaKnown RBP8.04□□□□□ -1.12
CCDC38-207ENST00000549752 XRCC3O43542 346 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 SSX5O60225 188 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 OR2A4O95047 310 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 DHFRP00374 187 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 CLEC2LP0C7M8 214 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
CCDC38-207ENST00000549752 LORP23490 312 aaPredicted RBP8.04□□□□□ -1.12
CCDC38-207ENST00000549752 FCGR2CP31995 323 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 CATR1Q13166 79 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 UBE2NLQ5JXB2 153 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 FAM223AQ8IWN6 122 aa8.04□□□□□ -1.12
CCDC38-207ENST00000549752 OR13F1Q8NGS4 319 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms