RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CT45A5P0DMU8 189 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CT45A7P0DMV0 189 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV4-31P0DP07 118 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 DUSP1P28562 367 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 RPL29P47914 159 aaKnown RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CNN1P51911 297 aaKnown RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 SMCO1Q147U7 214 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 PRR31Q5SQ13 230 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 FAM27D1Q5T7N8 215 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 GLCCI1Q86VQ1 547 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 OR8B3Q8NGG8 313 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 GALMQ96C23 342 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 OR8B2Q96RD0 313 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 SDHAF2Q9NX18 166 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 RCL1Q9Y2P8 373 aaKnown RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 KLF12Q9Y4X4 402 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 C3orf85A0A1B0GTC6 90 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 J3QKU1 62 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 TRIAP1O43715 76 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 IGKV1-5P01602 117 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 NPSP0C0P6 89 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CD99P14209 185 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 OPRK1P41145 380 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 TAF13Q15543 124 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CT45A1Q5HYN5 189 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 IDNKQ5T6J7 187 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 IDO2Q6ZQW0 420 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 ZCCHC24Q8N2G6 241 aaKnown RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 OR5H2Q8NGV7 314 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 OR4S2Q8NH73 311 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CT45A3Q8NHU0 189 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 MS4A10Q96PG2 267 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 GPR173Q9NS66 373 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 U3KQ87 197 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 V9GYQ6 96 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 BRWD1Q9NSI6 2320 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 IGLV11-55A0A075B6I3 123 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 TRAV25A0A0B4J276 109 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 BET1O15155 118 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 CD3GP09693 182 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 FOLR2P14207 255 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 TGFBR1P36897 503 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 SULT1A2P50226 295 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 RAB9AP51151 201 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 EIF5AP63241 154 aaKnown RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 FAM27E3Q08E93 113 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 LRRC75BQ2VPJ9 315 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 PRR30Q53SZ7 412 aaPredicted RBP3.88□□□□□ -1.79
SCAF11-212ENST00000549162 FAM131AQ6UXB0 335 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 NRARPQ7Z6K4 114 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 OR13C9Q8NGT0 318 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 PHB2Q99623 299 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 IKZF2Q9UKS7 526 aa3.88□□□□□ -1.79
SCAF11-212ENST00000549162 GTF3C1Q12789 2109 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 RNASEK-C17orf49H0YIS7 233 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 C19orf84I3L1E1 186 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 K7EQM0 130 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 HBZP02008 142 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 S100A7P31151 101 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 OR2B8PP59922 312 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 PDE6HQ13956 83 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 INSL4Q14641 139 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 LRRC10Q5BKY1 277 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 BTNL8Q6UX41 500 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ERASQ7Z444 233 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 DRAM1Q8N682 238 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 TMEM217Q8N7C4 229 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 LINC00482Q8N8I6 264 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 OR1P1Q8NH06 330 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ITLN1Q8WWA0 313 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 JSRP1Q96MG2 331 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-212ENST00000549162 TRAV30A0A087WSZ9 112 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 TRGV10A0A0A0MS01 117 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 IGHV2-26A0A0B4J1V2 119 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ATP6V1G2-DDX39BF2Z307 99 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 SPINT2O43291 252 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ELANEP08246 267 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 GSTT2P0CG29 244 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 CEACAM3P40198 252 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 CATR1Q13166 79 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 HLXQ14774 488 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-212ENST00000549162 RNASE10Q5GAN6 216 aaKnown RBP3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ZNF585AQ6P3V2 769 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 SPAG16Q8N0X2 631 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 GRPEL2Q8TAA5 225 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 CMSS1Q9BQ75 279 aaKnown RBP3.87□□□□□ -1.79
SCAF11-212ENST00000549162 SPATA25Q9BR10 227 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 CLEC7AQ9BXN2 247 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 MAGT1Q9H0U3 335 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 WDR83OSQ9Y284 106 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 SRCAPQ6ZRS2 3230 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 INMT-MINDY4F8WBC2 141 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 PHF1O43189 567 aaPredicted RBP3.87□□□□□ -1.79
SCAF11-212ENST00000549162 OR5G3P0C626 314 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 OR5H8P0DN80 308 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 CA6P23280 308 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 TATDN3Q17R31 274 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 CTRB2Q6GPI1 263 aa3.87□□□□□ -1.79
SCAF11-212ENST00000549162 ZNF562Q6V9R5 426 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms