RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
LETMD1-209ENST00000547318 OR2T10Q8NGZ9 312 aa12.13□□□□□ -0.47
LETMD1-209ENST00000547318 STARD4Q96DR4 205 aa12.13□□□□□ -0.47
LETMD1-209ENST00000547318 SFXN3Q9BWM7 321 aa12.13□□□□□ -0.47
LETMD1-209ENST00000547318 MED13Q9UHV7 2174 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 IGKV1D-17A0A075B6S4 117 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 TRAV20A0A0B4J274 112 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 IGHV3-64DA0A0J9YX35 117 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 M0R1X1 148 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 ATXN7O15265 892 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-209ENST00000547318 MT-CO2P00403 227 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 GLRXP35754 106 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 GATA4P43694 442 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 RAB31Q13636 194 aa12.12□□□□□ -0.47
LETMD1-209ENST00000547318 PACRGQ96M98 296 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-209ENST00000547318 HEYLQ9NQ87 328 aaPredicted RBP12.12□□□□□ -0.47
LETMD1-209ENST00000547318 TRAV9-1A0A075B6T8 112 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 IGHV3-43A0A0B4J1X8 118 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 PRSS46E5RG02 174 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 CEACAM4O75871 244 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 IGHV3-43DP0DP04 118 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 LOXL3P58215 753 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 RELBQ01201 579 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 EDDM3AQ14507 147 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 HNF4GQ14541 408 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 POU2AF1Q16633 256 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 FAM209BQ5JX69 171 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 OR1P1Q8NH06 330 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 DDB2Q92466 427 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 IFI27L2Q9H2X8 130 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-209ENST00000547318 PTPRBP23467 1997 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 NKX2-8O15522 239 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 GALR2O43603 387 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-209ENST00000547318 LHBP01229 141 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 STAG3L2P0CL84 134 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 STAG3L3P0CL85 134 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 KLF3P57682 345 aaPredicted RBP12.11□□□□□ -0.47
LETMD1-209ENST00000547318 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 RFESDQ8TAC1 157 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 MEGF10Q96KG7 1140 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 FAM234AQ9H0X4 552 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 CALYQ9NYX4 217 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 DKK4Q9UBT3 224 aa12.11□□□□□ -0.47
LETMD1-209ENST00000547318 C15orf61A6NNL5 157 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 GFRA3O60609 400 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 CGB3P0DN86 165 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 CGB7P0DN87 165 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 FABP4P15090 132 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 PKIAP61925 76 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TLE1Q04724 770 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 FOXL1Q12952 345 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TREML4Q6UXN2 200 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TMEM140Q9NV12 185 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 DUSP13Q9UII6 198 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 LY96Q9Y6Y9 160 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 IGLV3-9A0A075B6K5 115 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 DEFB108AA8MXU0 73 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 PROP1O75360 226 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 CRYAAP02489 173 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 EGR1P18146 543 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
LETMD1-209ENST00000547318 LINC01551Q86U37 167 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TCF19Q9Y242 345 aa12.1□□□□□ -0.47
LETMD1-209ENST00000547318 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
LETMD1-209ENST00000547318 TM4SF5O14894 197 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 HMGB3O15347 200 aaKnown RBP12.09□□□□□ -0.47
LETMD1-209ENST00000547318 GCGP01275 180 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 CCKARP32238 428 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 SELENOVP59797 346 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 JOSD1Q15040 202 aaPredicted RBP12.09□□□□□ -0.47
LETMD1-209ENST00000547318 ZADH2Q8N4Q0 377 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 SDSLQ96GA7 329 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 ENY2Q9NPA8 101 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 PXMP4Q9Y6I8 212 aa12.09□□□□□ -0.47
LETMD1-209ENST00000547318 TNRC18O15417 2968 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-209ENST00000547318 HSPE1P61604 102 aaKnown RBP12.08□□□□□ -0.48
LETMD1-209ENST00000547318 RHOBP62745 196 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 DEFA6Q01524 100 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-209ENST00000547318 OR2V2Q96R30 315 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 OPN3Q9H1Y3 402 aaPredicted RBP12.08□□□□□ -0.48
LETMD1-209ENST00000547318 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 PRNDQ9UKY0 176 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 FZR1Q9UM11 496 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 ZNF257Q9Y2Q1 563 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 TRGV10A0A0A0MS01 117 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 KBTBD11-OT1A0A1B0GTJ5 212 aa12.08□□□□□ -0.48
LETMD1-209ENST00000547318 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms